Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00473A8K010 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00473A8K010 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00473A8K010 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00473A8K010 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LINC00473A8K010 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00473A8K010 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LINC00473A8K010 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00473A8K010 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00473A8K010 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00473A8K010 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.25■□□□□ 0.35
LINC00473A8K010 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00473A8K010 AC024257.2-201ENST00000549699 147 ntBASIC17.25■□□□□ 0.35
LINC00473A8K010 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.25■□□□□ 0.35
LINC00473A8K010 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00473A8K010 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.25■□□□□ 0.35
LINC00473A8K010 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00473A8K010 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
LINC00473A8K010 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00473A8K010 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00473A8K010 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.25■□□□□ 0.35
LINC00473A8K010 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00473A8K010 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LINC00473A8K010 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LINC00473A8K010 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00473A8K010 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC00473A8K010 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00473A8K010 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00473A8K010 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
LINC00473A8K010 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC00473A8K010 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC00473A8K010 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC00473A8K010 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00473A8K010 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00473A8K010 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LINC00473A8K010 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00473A8K010 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00473A8K010 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC00473A8K010 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LINC00473A8K010 AC233992.3-201ENST00000607491 485 ntBASIC17.24■□□□□ 0.35
LINC00473A8K010 AL136162.1-201ENST00000607711 1078 ntBASIC17.24■□□□□ 0.35
LINC00473A8K010 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00473A8K010 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00473A8K010 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00473A8K010 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00473A8K010 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LINC00473A8K010 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.24■□□□□ 0.35
LINC00473A8K010 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.23■□□□□ 0.35
LINC00473A8K010 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
LINC00473A8K010 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LINC00473A8K010 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LINC00473A8K010 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.23■□□□□ 0.35
LINC00473A8K010 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.23■□□□□ 0.35
LINC00473A8K010 AC131212.1-201ENST00000613771 668 ntBASIC17.23■□□□□ 0.35
LINC00473A8K010 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.23■□□□□ 0.35
LINC00473A8K010 AL049796.1-201ENST00000565336 1766 ntBASIC17.23■□□□□ 0.35
LINC00473A8K010 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00473A8K010 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00473A8K010 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.22■□□□□ 0.35
LINC00473A8K010 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LINC00473A8K010 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LINC00473A8K010 AL157384.1-201ENST00000445995 2473 ntBASIC17.22■□□□□ 0.35
LINC00473A8K010 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LINC00473A8K010 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.22■□□□□ 0.35
LINC00473A8K010 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.22■□□□□ 0.35
LINC00473A8K010 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00473A8K010 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.22■□□□□ 0.35
LINC00473A8K010 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.22■□□□□ 0.35
LINC00473A8K010 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.22■□□□□ 0.35
LINC00473A8K010 AC126544.1-201ENST00000580842 1059 ntBASIC17.22■□□□□ 0.35
LINC00473A8K010 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
LINC00473A8K010 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00473A8K010 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
LINC00473A8K010 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.22■□□□□ 0.35
LINC00473A8K010 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00473A8K010 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00473A8K010 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LINC00473A8K010 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00473A8K010 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00473A8K010 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms