Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC01548A6NM66 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC01548A6NM66 AC104564.3-201ENST00000582367 638 ntBASIC16.78■□□□□ 0.28
LINC01548A6NM66 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.78■□□□□ 0.28
LINC01548A6NM66 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01548A6NM66 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01548A6NM66 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01548A6NM66 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01548A6NM66 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01548A6NM66 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
LINC01548A6NM66 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01548A6NM66 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01548A6NM66 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01548A6NM66 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01548A6NM66 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LINC01548A6NM66 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01548A6NM66 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01548A6NM66 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01548A6NM66 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01548A6NM66 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01548A6NM66 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LINC01548A6NM66 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01548A6NM66 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC01548A6NM66 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LINC01548A6NM66 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.77■□□□□ 0.27
LINC01548A6NM66 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC01548A6NM66 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
LINC01548A6NM66 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC01548A6NM66 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC01548A6NM66 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01548A6NM66 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01548A6NM66 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01548A6NM66 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01548A6NM66 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01548A6NM66 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
LINC01548A6NM66 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC01548A6NM66 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.76■□□□□ 0.27
LINC01548A6NM66 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC01548A6NM66 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.76■□□□□ 0.27
LINC01548A6NM66 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC01548A6NM66 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01548A6NM66 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01548A6NM66 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01548A6NM66 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC01548A6NM66 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
LINC01548A6NM66 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01548A6NM66 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LINC01548A6NM66 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC01548A6NM66 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01548A6NM66 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.75■□□□□ 0.27
LINC01548A6NM66 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC01548A6NM66 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC01548A6NM66 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.75■□□□□ 0.27
LINC01548A6NM66 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.75■□□□□ 0.27
LINC01548A6NM66 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
LINC01548A6NM66 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC01548A6NM66 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LINC01548A6NM66 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01548A6NM66 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01548A6NM66 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.75■□□□□ 0.27
LINC01548A6NM66 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01548A6NM66 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
LINC01548A6NM66 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01548A6NM66 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01548A6NM66 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01548A6NM66 FBXW4P1-201ENST00000426721 2239 ntBASIC16.74■□□□□ 0.27
LINC01548A6NM66 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01548A6NM66 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01548A6NM66 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01548A6NM66 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01548A6NM66 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01548A6NM66 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.74■□□□□ 0.27
LINC01548A6NM66 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
LINC01548A6NM66 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.74■□□□□ 0.27
LINC01548A6NM66 EEF1DP3-203ENST00000566025 782 ntBASIC16.74■□□□□ 0.27
LINC01548A6NM66 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01548A6NM66 AC092437.1-201ENST00000624794 1048 ntBASIC16.74■□□□□ 0.27
LINC01548A6NM66 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LINC01548A6NM66 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01548A6NM66 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.74■□□□□ 0.27
LINC01548A6NM66 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01548A6NM66 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01548A6NM66 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01548A6NM66 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01548A6NM66 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC01548A6NM66 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01548A6NM66 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01548A6NM66 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC01548A6NM66 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.73■□□□□ 0.27
LINC01548A6NM66 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC01548A6NM66 KRT19P1-201ENST00000405746 1186 ntBASIC16.73■□□□□ 0.27
LINC01548A6NM66 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01548A6NM66 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.73■□□□□ 0.27
LINC01548A6NM66 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.73■□□□□ 0.27
LINC01548A6NM66 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.73■□□□□ 0.27
LINC01548A6NM66 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01548A6NM66 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01548A6NM66 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.73■□□□□ 0.27
LINC01548A6NM66 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01548A6NM66 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms