Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 DUX4L3-201ENST00000630187 1275 ntBASIC23.68■■□□□ 1.38
SPDYE4A6NLX3 DUX4L7-201ENST00000630678 1275 ntBASIC23.68■■□□□ 1.38
SPDYE4A6NLX3 DUX4L5-201ENST00000630834 1275 ntBASIC23.68■■□□□ 1.38
SPDYE4A6NLX3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPDYE4A6NLX3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPDYE4A6NLX3 AL157384.1-201ENST00000445995 2473 ntBASIC23.68■■□□□ 1.38
SPDYE4A6NLX3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 MIR572-201ENST00000384983 95 ntBASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 AC027612.3-201ENST00000413684 1047 ntBASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 AL354811.1-201ENST00000610286 706 ntBASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SPDYE4A6NLX3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.66■■□□□ 1.38
SPDYE4A6NLX3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.66■■□□□ 1.38
SPDYE4A6NLX3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SPDYE4A6NLX3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPDYE4A6NLX3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPDYE4A6NLX3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.66■■□□□ 1.38
SPDYE4A6NLX3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPDYE4A6NLX3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPDYE4A6NLX3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 AC004911.1-201ENST00000416316 871 ntBASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 AC123595.1-201ENST00000440769 1046 ntBASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
SPDYE4A6NLX3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
SPDYE4A6NLX3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
SPDYE4A6NLX3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SPDYE4A6NLX3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.64■■□□□ 1.37
SPDYE4A6NLX3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SPDYE4A6NLX3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SPDYE4A6NLX3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.64■■□□□ 1.37
SPDYE4A6NLX3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.64■■□□□ 1.37
SPDYE4A6NLX3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.64■■□□□ 1.37
SPDYE4A6NLX3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
SPDYE4A6NLX3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SPDYE4A6NLX3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SPDYE4A6NLX3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SPDYE4A6NLX3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SPDYE4A6NLX3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SPDYE4A6NLX3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SPDYE4A6NLX3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SPDYE4A6NLX3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SPDYE4A6NLX3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SPDYE4A6NLX3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SPDYE4A6NLX3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SPDYE4A6NLX3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SPDYE4A6NLX3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SPDYE4A6NLX3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SPDYE4A6NLX3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SPDYE4A6NLX3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.62■■□□□ 1.37
SPDYE4A6NLX3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SPDYE4A6NLX3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SPDYE4A6NLX3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.62■■□□□ 1.37
SPDYE4A6NLX3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SPDYE4A6NLX3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SPDYE4A6NLX3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SPDYE4A6NLX3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPDYE4A6NLX3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms