Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CGB1A6NKQ9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CGB1A6NKQ9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.92■□□□□ 0.3
CGB1A6NKQ9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CGB1A6NKQ9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CGB1A6NKQ9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CGB1A6NKQ9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CGB1A6NKQ9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.92■□□□□ 0.3
CGB1A6NKQ9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CGB1A6NKQ9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.92■□□□□ 0.3
CGB1A6NKQ9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CGB1A6NKQ9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.92■□□□□ 0.3
CGB1A6NKQ9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CGB1A6NKQ9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CGB1A6NKQ9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.92■□□□□ 0.3
CGB1A6NKQ9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.92■□□□□ 0.3
CGB1A6NKQ9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 AP006587.3-201ENST00000525742 1516 ntBASIC16.91■□□□□ 0.3
CGB1A6NKQ9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 AL024507.2-201ENST00000606070 2574 ntBASIC16.91■□□□□ 0.3
CGB1A6NKQ9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CGB1A6NKQ9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 AC008406.3-201ENST00000620001 1374 ntBASIC16.9■□□□□ 0.3
CGB1A6NKQ9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 AC096631.2-201ENST00000436136 790 ntBASIC16.9■□□□□ 0.3
CGB1A6NKQ9 IGHV3-19-201ENST00000521488 291 ntBASIC16.9■□□□□ 0.3
CGB1A6NKQ9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.9■□□□□ 0.3
CGB1A6NKQ9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CGB1A6NKQ9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 AC126544.1-201ENST00000580842 1059 ntBASIC16.89■□□□□ 0.29
CGB1A6NKQ9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms