Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RCCD1A6NED2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.58■■□□□ 1.21
RCCD1A6NED2 GUSBP5-201ENST00000418136 578 ntBASIC22.58■■□□□ 1.21
RCCD1A6NED2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.58■■□□□ 1.21
RCCD1A6NED2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.58■■□□□ 1.21
RCCD1A6NED2 AL035685.1-201ENST00000636663 812 ntBASIC22.58■■□□□ 1.21
RCCD1A6NED2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
RCCD1A6NED2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RCCD1A6NED2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RCCD1A6NED2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RCCD1A6NED2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RCCD1A6NED2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RCCD1A6NED2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RCCD1A6NED2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RCCD1A6NED2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RCCD1A6NED2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RCCD1A6NED2 SERBP1P1-201ENST00000396021 1160 ntBASIC22.57■■□□□ 1.2
RCCD1A6NED2 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.57■■□□□ 1.2
RCCD1A6NED2 SRD5A1P1-201ENST00000442297 786 ntBASIC22.57■■□□□ 1.2
RCCD1A6NED2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.57■■□□□ 1.2
RCCD1A6NED2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.57■■□□□ 1.2
RCCD1A6NED2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RCCD1A6NED2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RCCD1A6NED2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RCCD1A6NED2 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.56■■□□□ 1.2
RCCD1A6NED2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RCCD1A6NED2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RCCD1A6NED2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RCCD1A6NED2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.56■■□□□ 1.2
RCCD1A6NED2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.56■■□□□ 1.2
RCCD1A6NED2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RCCD1A6NED2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
RCCD1A6NED2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.56■■□□□ 1.2
RCCD1A6NED2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
RCCD1A6NED2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.56■■□□□ 1.2
RCCD1A6NED2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.56■■□□□ 1.2
RCCD1A6NED2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.55■■□□□ 1.2
RCCD1A6NED2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RCCD1A6NED2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RCCD1A6NED2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RCCD1A6NED2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RCCD1A6NED2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RCCD1A6NED2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RCCD1A6NED2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.55■■□□□ 1.2
RCCD1A6NED2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RCCD1A6NED2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RCCD1A6NED2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RCCD1A6NED2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.55■■□□□ 1.2
RCCD1A6NED2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RCCD1A6NED2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RCCD1A6NED2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RCCD1A6NED2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RCCD1A6NED2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RCCD1A6NED2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
RCCD1A6NED2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RCCD1A6NED2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.54■■□□□ 1.2
RCCD1A6NED2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RCCD1A6NED2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RCCD1A6NED2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RCCD1A6NED2 AL034346.1-201ENST00000568244 1277 ntBASIC22.54■■□□□ 1.2
RCCD1A6NED2 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.54■■□□□ 1.2
RCCD1A6NED2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
RCCD1A6NED2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
RCCD1A6NED2 PLK5-205ENST00000642079 1969 ntBASIC22.54■■□□□ 1.2
RCCD1A6NED2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.53■■□□□ 1.2
RCCD1A6NED2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RCCD1A6NED2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RCCD1A6NED2 SLC47A1P1-202ENST00000449666 945 ntBASIC22.53■■□□□ 1.2
RCCD1A6NED2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.53■■□□□ 1.2
RCCD1A6NED2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RCCD1A6NED2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RCCD1A6NED2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RCCD1A6NED2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.53■■□□□ 1.2
RCCD1A6NED2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.53■■□□□ 1.2
RCCD1A6NED2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RCCD1A6NED2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.52■■□□□ 1.2
RCCD1A6NED2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RCCD1A6NED2 AP006587.3-201ENST00000525742 1516 ntBASIC22.52■■□□□ 1.2
RCCD1A6NED2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RCCD1A6NED2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RCCD1A6NED2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
RCCD1A6NED2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RCCD1A6NED2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RCCD1A6NED2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
RCCD1A6NED2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RCCD1A6NED2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RCCD1A6NED2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RCCD1A6NED2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
RCCD1A6NED2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RCCD1A6NED2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.52■■□□□ 1.2
RCCD1A6NED2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RCCD1A6NED2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RCCD1A6NED2 AC073314.1-201ENST00000568729 2216 ntBASIC22.51■■□□□ 1.19
RCCD1A6NED2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RCCD1A6NED2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RCCD1A6NED2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.51■■□□□ 1.19
RCCD1A6NED2 MIR4466-201ENST00000606121 54 ntBASIC22.51■■□□□ 1.19
RCCD1A6NED2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RCCD1A6NED2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RCCD1A6NED2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms