Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT1A5YKK6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT1A5YKK6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT1A5YKK6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.5■□□□□ 0.87
CNOT1A5YKK6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.5■□□□□ 0.87
CNOT1A5YKK6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.5■□□□□ 0.87
CNOT1A5YKK6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.5■□□□□ 0.87
CNOT1A5YKK6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.5■□□□□ 0.87
CNOT1A5YKK6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.5■□□□□ 0.87
CNOT1A5YKK6 AL049637.2-201ENST00000641778 930 ntBASIC20.5■□□□□ 0.87
CNOT1A5YKK6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.5■□□□□ 0.87
CNOT1A5YKK6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CNOT1A5YKK6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT1A5YKK6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT1A5YKK6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNOT1A5YKK6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.49■□□□□ 0.87
CNOT1A5YKK6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CNOT1A5YKK6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNOT1A5YKK6 AL355472.2-201ENST00000422958 438 ntBASIC20.49■□□□□ 0.87
CNOT1A5YKK6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNOT1A5YKK6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.49■□□□□ 0.87
CNOT1A5YKK6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CNOT1A5YKK6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNOT1A5YKK6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNOT1A5YKK6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.49■□□□□ 0.87
CNOT1A5YKK6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.49■□□□□ 0.87
CNOT1A5YKK6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNOT1A5YKK6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNOT1A5YKK6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.49■□□□□ 0.87
CNOT1A5YKK6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.49■□□□□ 0.87
CNOT1A5YKK6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
CNOT1A5YKK6 PNMA6B-201ENST00000538162 1200 ntBASIC20.49■□□□□ 0.87
CNOT1A5YKK6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNOT1A5YKK6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNOT1A5YKK6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNOT1A5YKK6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CNOT1A5YKK6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNOT1A5YKK6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNOT1A5YKK6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNOT1A5YKK6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.48■□□□□ 0.87
CNOT1A5YKK6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.48■□□□□ 0.87
CNOT1A5YKK6 KRT17P1-201ENST00000399211 1546 ntBASIC20.48■□□□□ 0.87
CNOT1A5YKK6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CNOT1A5YKK6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CNOT1A5YKK6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNOT1A5YKK6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNOT1A5YKK6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNOT1A5YKK6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.48■□□□□ 0.87
CNOT1A5YKK6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNOT1A5YKK6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNOT1A5YKK6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNOT1A5YKK6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
CNOT1A5YKK6 AP004607.7-201ENST00000527152 1677 ntBASIC20.47■□□□□ 0.87
CNOT1A5YKK6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNOT1A5YKK6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CNOT1A5YKK6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNOT1A5YKK6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNOT1A5YKK6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.47■□□□□ 0.87
CNOT1A5YKK6 POU5F1P4-201ENST00000413175 1085 ntBASIC20.47■□□□□ 0.87
CNOT1A5YKK6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.47■□□□□ 0.87
CNOT1A5YKK6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.47■□□□□ 0.87
CNOT1A5YKK6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNOT1A5YKK6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.47■□□□□ 0.87
CNOT1A5YKK6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
CNOT1A5YKK6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.47■□□□□ 0.87
CNOT1A5YKK6 AP003733.4-201ENST00000623785 1697 ntBASIC20.47■□□□□ 0.87
CNOT1A5YKK6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CNOT1A5YKK6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNOT1A5YKK6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 KRT17P3-201ENST00000420566 1262 ntBASIC20.46■□□□□ 0.87
CNOT1A5YKK6 KRT18P35-201ENST00000510488 1269 ntBASIC20.46■□□□□ 0.87
CNOT1A5YKK6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 AC060766.5-201ENST00000590539 871 ntBASIC20.46■□□□□ 0.87
CNOT1A5YKK6 AL591742.1-201ENST00000604433 565 ntBASIC20.46■□□□□ 0.87
CNOT1A5YKK6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 AL355075.4-201ENST00000554988 638 ntBASIC20.46■□□□□ 0.87
CNOT1A5YKK6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT1A5YKK6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CNOT1A5YKK6 TMPOP1-202ENST00000424642 1267 ntBASIC20.45■□□□□ 0.86
CNOT1A5YKK6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.45■□□□□ 0.86
CNOT1A5YKK6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CNOT1A5YKK6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNOT1A5YKK6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.45■□□□□ 0.86
CNOT1A5YKK6 KRT17P2-201ENST00000300992 1314 ntBASIC20.45■□□□□ 0.86
CNOT1A5YKK6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms