Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 TERT-206ENST00000508104 2486 ntTSL 5 BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 AC006015.1-201ENST00000429970 570 ntBASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
IGHV4-28A0A0C4DH34 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IGHV4-28A0A0C4DH34 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
IGHV4-28A0A0C4DH34 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IGHV4-28A0A0C4DH34 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
IGHV4-28A0A0C4DH34 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IGHV4-28A0A0C4DH34 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.31■□□□□ 0.04
IGHV4-28A0A0C4DH34 AP001160.3-201ENST00000601484 763 ntBASIC15.31■□□□□ 0.04
IGHV4-28A0A0C4DH34 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.31■□□□□ 0.04
IGHV4-28A0A0C4DH34 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.31■□□□□ 0.04
IGHV4-28A0A0C4DH34 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.31■□□□□ 0.04
IGHV4-28A0A0C4DH34 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
IGHV4-28A0A0C4DH34 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IGHV4-28A0A0C4DH34 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IGHV4-28A0A0C4DH34 AC233723.2-201ENST00000623798 2106 ntBASIC15.31■□□□□ 0.04
IGHV4-28A0A0C4DH34 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 RARRES2P11-201ENST00000635158 484 ntBASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV4-28A0A0C4DH34 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 KRT18P11-201ENST00000435214 1283 ntBASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 BID-214ENST00000617586 542 ntTSL 5 BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGHV4-28A0A0C4DH34 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 GUSBP5-202ENST00000510805 1989 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms