Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 UBE2D3-211ENST00000502404 574 ntTSL 4 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 UBE2D3-219ENST00000505207 527 ntTSL 5 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 MEG3-223ENST00000524131 721 ntTSL 5 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 FTH1-203ENST00000529191 530 ntTSL 2 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 AC109635.1-201ENST00000529200 490 ntBASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 AAMDC-211ENST00000533193 606 ntTSL 5 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 DUXAP9-202ENST00000549484 596 ntTSL 2 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 AC091544.3-202ENST00000554246 373 ntBASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 IGHV1OR15-2-201ENST00000558824 353 ntBASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 AC120114.5-201ENST00000562285 556 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 AC051619.8-201ENST00000563103 308 ntBASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 AC120057.3-201ENST00000570760 776 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 ATF4P2-201ENST00000601944 1073 ntBASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 DUXAP10-203ENST00000610531 596 ntTSL 2 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 Metazoa_SRP.154-201ENST00000615469 268 ntBASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 FP236240.2-201ENST00000623896 1052 ntTSL 2 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 SOX9-AS1-219ENST00000630770 961 ntTSL 5 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 AC006453.2-201ENST00000636531 1196 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 AC006974.2-201ENST00000637240 1227 ntTSL 5 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 PCDHGB4-201ENST00000519479 4578 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 AL359736.1-201ENST00000382141 4157 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 CACNB2-208ENST00000377331 1827 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 UHRF1-207ENST00000624301 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 GRAMD1B-206ENST00000529432 6266 ntTSL 2 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 CYP11B2-201ENST00000323110 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 IMPDH2-201ENST00000326739 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 GRM4-201ENST00000374177 3590 ntTSL 2 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 HDC-201ENST00000267845 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 KLHL10-201ENST00000293303 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 ZMYND8-202ENST00000311275 5362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 AC008555.2-202ENST00000601776 5302 ntTSL 2 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 SLC18A1-202ENST00000276373 2753 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 ELP4-218ENST00000639570 5795 ntTSL 5 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 KCNMA1-259ENST00000639406 5567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 ERCC1-204ENST00000423698 3119 ntTSL 2 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 WDR78-202ENST00000371023 1697 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 RAB3GAP2-202ENST00000358951 7257 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 GOLM1-202ENST00000388711 3022 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 TLE3-222ENST00000560589 3509 ntTSL 5 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 TCHP-202ENST00000405876 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 EIF4BP8-201ENST00000464704 1826 ntBASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 PSG9-208ENST00000596730 1812 ntTSL 3 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 SPDYE1-201ENST00000258704 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 NUAK2-201ENST00000367157 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 MAP3K9-204ENST00000554146 2982 ntTSL 2 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 ELOVL3-201ENST00000370005 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 LINC00877-203ENST00000468646 2506 ntTSL 2 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 CNBD2-204ENST00000489667 2531 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 ODF2-206ENST00000393533 2086 ntTSL 2 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 APBA2-202ENST00000411764 3599 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 NMRAL2P-201ENST00000306399 891 ntBASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 RNA5S9-201ENST00000364451 119 ntBASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 AC017104.3-201ENST00000370380 568 ntTSL 4 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 SUN5-202ENST00000375519 513 ntTSL 2 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 IGKV3D-15-201ENST00000417279 396 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 OR6V1-201ENST00000418316 1028 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 CIDECP-203ENST00000424691 1088 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 AL590640.1-201ENST00000425205 379 ntTSL 3 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 AL627313.1-201ENST00000428860 238 ntBASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 AL513523.3-201ENST00000434575 316 ntTSL 2 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 AC018693.2-201ENST00000435255 530 ntBASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 CDK5P1-201ENST00000442838 877 ntBASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 IP6K2-218ENST00000443964 973 ntTSL 4 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 AC093157.1-201ENST00000453011 794 ntTSL 3 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 TRAPPC12-AS1-201ENST00000453806 908 ntTSL 3 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 RABL3-206ENST00000483733 760 ntTSL 5 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 RNA5SP408-201ENST00000516115 100 ntBASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 AC040970.1-201ENST00000520885 483 ntTSL 2 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 CYB5RL-209ENST00000534324 1148 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 IST1-215ENST00000538850 1125 ntTSL 3 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 FAM19A2-214ENST00000551449 580 ntTSL 4 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 AC011773.4-201ENST00000562577 487 ntTSL 2 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 AC113208.2-201ENST00000565381 608 ntBASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 MT1F-204ENST00000568475 416 ntTSL 2 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 COX10-AS1-203ENST00000577798 936 ntTSL 3 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 AC067819.1-201ENST00000583846 154 ntBASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 Metazoa_SRP.82-201ENST00000611637 265 ntBASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 AC020765.4-201ENST00000621738 400 ntBASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 AC006449.7-201ENST00000623658 366 ntBASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 AC090950.2-201ENST00000624280 660 ntBASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 TRPC4-206ENST00000379705 4059 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 SLC4A9-204ENST00000506757 3277 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 C16orf82-202ENST00000505035 2459 ntAPPRIS P5 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 FOSB-206ENST00000586615 3774 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 CUL1-203ENST00000602748 3054 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 GABPB1-210ENST00000560825 1412 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 AC010969.2-201ENST00000602458 3231 ntBASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 CWC25-202ENST00000614790 3234 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 PRR5L-216ENST00000530639 2291 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 TPM3-223ENST00000611659 3149 ntTSL 3 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 CPEB1-208ENST00000611163 1919 ntTSL 2 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 DAB1-206ENST00000414851 5168 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 RNASE4-202ENST00000555597 1341 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 FAM214B-201ENST00000322813 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 Z97192.1-201ENST00000391625 3894 ntTSL 2 BASIC10.31□□□□□ -0.76
NPIPA3F8WFD2 BCAT1-205ENST00000539282 1811 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 491.9 ms