Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC006030.1-201ENST00000451608 5059 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 ATP2A1-203ENST00000536376 3130 ntTSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 SYNGR4-201ENST00000344846 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 SNORA65-201ENST00000364432 130 ntBASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 DDB2-202ENST00000378600 717 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 DDB2-204ENST00000378603 1092 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 SRMP1-201ENST00000398959 885 ntBASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AL022722.1-201ENST00000406333 582 ntBASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 HM13-IT1-201ENST00000421894 356 ntTSL 3 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 RAB15-202ENST00000426039 683 ntTSL 3 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 LINC01874-201ENST00000427398 510 ntTSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AL356481.1-201ENST00000434999 578 ntTSL 5 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 ALG1L10P-201ENST00000437882 424 ntBASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AL160270.2-201ENST00000441226 473 ntBASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AC005297.3-201ENST00000446214 756 ntBASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AC007163.1-201ENST00000447972 877 ntTSL 5 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AC096536.2-201ENST00000450503 343 ntTSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AC245595.1-201ENST00000452399 549 ntTSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 RN7SL150P-201ENST00000462298 262 ntBASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AC099542.1-202ENST00000464131 1014 ntTSL 5 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 FXYD4-201ENST00000476166 770 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 TMEM255B-205ENST00000488362 694 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AKR1B1P2-201ENST00000494640 934 ntBASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 LINC02107-201ENST00000513039 462 ntTSL 3 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AC104051.1-201ENST00000520426 570 ntTSL 4 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AC233992.1-201ENST00000525023 444 ntTSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AC124312.3-201ENST00000567527 1236 ntBASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AP003396.5-201ENST00000578216 632 ntTSL 5 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 MYL12A-207ENST00000579226 947 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AC005154.5-201ENST00000583191 368 ntTSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AC024575.1-201ENST00000590399 682 ntTSL 5 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 LINC01872-201ENST00000594261 915 ntTSL 5 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AC025171.5-201ENST00000607830 920 ntBASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 LINC02371-201ENST00000613818 567 ntTSL 4 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AC006453.2-203ENST00000637196 774 ntTSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 IL7-211ENST00000639719 597 ntTSL 5 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 RBMX2-205ENST00000639890 871 ntTSL 5 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 PAAF1-210ENST00000541951 1383 ntTSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 LINC00663-201ENST00000586645 1357 ntTSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 MYLK-205ENST00000360772 10027 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 CCDC36-202ENST00000366429 1568 ntTSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 ADCYAP1R1-202ENST00000396211 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AC234775.2-201ENST00000392722 1792 ntBASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 MAGEC2-201ENST00000247452 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 ACCS-201ENST00000263776 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 PEG10-203ENST00000488574 2587 ntTSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 MPP2-218ENST00000536246 4351 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 SACS-202ENST00000402364 15134 ntTSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 TBCEL-202ENST00000422003 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 CLPB-201ENST00000294053 3240 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 SLC8A3-201ENST00000216568 2916 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 CCDC144CP-201ENST00000340196 2823 ntTSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 C11orf54-215ENST00000617482 2417 ntTSL 3 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 KRT17P7-202ENST00000582261 2334 ntTSL 5 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 OPRM1-209ENST00000435918 2217 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 DYDC2-203ENST00000372198 1736 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 TMEM184C-201ENST00000296582 4178 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 NADK-204ENST00000378625 3653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 TROAP-215ENST00000551245 2771 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 DGKA-229ENST00000551156 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 CFAP52-201ENST00000352665 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 UTP3-201ENST00000254803 2073 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 TMEM33-203ENST00000504986 7482 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 ATAD2B-201ENST00000238789 8103 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 ZNF503-AS1-201ENST00000416398 1860 ntTSL 2 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 GRK1-201ENST00000335678 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 N4BP2L1-202ENST00000380130 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 CYP4A22-207ENST00000620131 1760 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 STPG2-201ENST00000295268 1652 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 AC142086.1-201ENST00000566260 1682 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 ARHGEF4-201ENST00000326016 3666 ntAPPRIS P3 TSL 2 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 MIR99AHG-220ENST00000635845 1588 ntTSL 5 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 SIDT2-202ENST00000324225 4406 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 CHI3L2-202ENST00000369748 1468 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 OR2Y1-201ENST00000307832 1058 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 MTRF1LP1-201ENST00000321235 679 ntBASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 C9orf85-201ENST00000334731 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 ITGAL-202ENST00000358164 4673 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 SRP9-202ENST00000366838 540 ntTSL 2 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 AC245052.2-201ENST00000413723 327 ntBASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 CNN2P9-201ENST00000417134 909 ntBASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 SUPT4H1P1-201ENST00000423067 340 ntBASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 ASS1P7-201ENST00000423174 1226 ntBASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 DAPK1-IT1-201ENST00000431813 702 ntTSL 3 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 AP001631.1-201ENST00000433840 1052 ntTSL 2 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 IFNWP19-201ENST00000438727 566 ntBASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 AC007952.3-203ENST00000439868 392 ntTSL 5 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 ATF4P1-201ENST00000443279 1073 ntBASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 AF274858.2-201ENST00000446370 617 ntTSL 2 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 AC106017.1-203ENST00000447506 392 ntTSL 5 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 SLC25A5P1-201ENST00000450250 898 ntBASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 RN7SL824P-201ENST00000470692 297 ntBASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 PSORS1C1-204ENST00000481450 501 ntTSL 2 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 IGKV2-28-201ENST00000482769 390 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
NPIPA3F8WFD2 AC020899.1-201ENST00000492855 602 ntBASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms