Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 AC010997.4-201ENST00000609200 1890 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 ARMT1-204ENST00000545879 2495 ntTSL 2 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 NARS-201ENST00000256854 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 NBPF5P-201ENST00000357046 1606 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 MAPK10-229ENST00000513186 1618 ntTSL 4 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 ARMC1-202ENST00000458464 2849 ntTSL 2 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 TP53BP1-210ENST00000450115 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 ANKRD20A2-201ENST00000377601 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 FAM71A-201ENST00000294829 2305 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 ZFYVE27-206ENST00000393677 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 UBL7-204ENST00000564488 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 AL359317.2-201ENST00000554898 1826 ntTSL 2 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 TFIP11-204ENST00000407690 3586 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 CASP7-204ENST00000369321 2620 ntTSL 2 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 RPS14-202ENST00000401695 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 GSDMB-205ENST00000418519 1597 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 CD44-209ENST00000433892 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 MYH13-201ENST00000252172 5992 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 RGS9-203ENST00000449996 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 KRT25-201ENST00000312150 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 CCND1-201ENST00000227507 4307 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 NLRP1-201ENST00000262467 5131 ntTSL 5 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 EHMT1-221ENST00000629335 3600 ntTSL 5 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 LINC01254-201ENST00000566225 2908 ntBASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 TCOF1-211ENST00000513346 4646 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 PLA2G6-203ENST00000402064 3011 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 MACF1-234ENST00000641012 4284 ntBASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 EPB41L1-203ENST00000373941 2652 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 AL117378.1-201ENST00000454596 2305 ntTSL 2 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 ARHGAP17-202ENST00000303665 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 GPR101-201ENST00000298110 1527 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 AC093915.1-201ENST00000605740 1543 ntBASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 MAP3K7CL-207ENST00000399934 1964 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 SYNPO2-201ENST00000307142 7295 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 SERPINA5-203ENST00000553780 2071 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 KLC4-215ENST00000479388 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 CBWD3-206ENST00000478048 1736 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 MYEF2-217ENST00000620867 1742 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 PRIMA1-202ENST00000393140 3711 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 C22orf31-201ENST00000216071 995 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 OR51V1-201ENST00000321255 966 ntBASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 C17orf99-201ENST00000340363 984 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 AL451074.1-201ENST00000400982 1216 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 AL591479.1-201ENST00000417001 635 ntBASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 AL158151.2-201ENST00000434250 241 ntTSL 2 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 AL392172.1-205ENST00000435378 768 ntTSL 5 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 AC092447.4-201ENST00000436042 673 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 Z98885.1-201ENST00000444011 465 ntBASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 AL031773.1-201ENST00000453579 554 ntTSL 3 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 MT1HL1-201ENST00000464121 316 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 ADCY10-203ENST00000476818 703 ntTSL 3 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 IGHV3-25-201ENST00000518224 351 ntBASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 AC008446.1-201ENST00000522454 451 ntBASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 RBM4-212ENST00000532968 757 ntTSL 2 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 AL512310.4-201ENST00000548456 411 ntBASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 RPL10P13-201ENST00000550757 303 ntBASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 AC090398.1-201ENST00000562795 1179 ntBASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 AC009035.1-201ENST00000562900 717 ntTSL 3 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 RN7SL296P-201ENST00000585237 299 ntBASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 AC020663.1-201ENST00000588099 556 ntTSL 4 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 LINC00963-211ENST00000608369 961 ntTSL 5 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 MED25-209ENST00000612791 881 ntTSL 5 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 AP000711.1-201ENST00000624964 917 ntBASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 OR51V1-202ENST00000641270 948 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 RIC3-203ENST00000343202 2929 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 SPRTN-202ENST00000295050 3468 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 BHLHB9-203ENST00000447531 4031 ntAPPRIS P1 TSL 4 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 DSTYK-202ENST00000367162 7874 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 NUP58-202ENST00000381736 4332 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 FAM239C-201ENST00000381105 2118 ntTSL 5 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 PRC1-201ENST00000361188 4087 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 CSPG4P10-201ENST00000456932 4817 ntBASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 NFE2L1-201ENST00000357480 4672 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 PTCH1-206ENST00000421141 7659 ntTSL 5 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 NDUFAF5-202ENST00000378106 5529 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 CIZ1-201ENST00000277465 2742 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 AC087525.1-202ENST00000559821 1988 ntTSL 5 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 GPR132-201ENST00000329797 3660 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 FERMT2-205ENST00000553373 2064 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 AC098679.1-201ENST00000503611 2917 ntTSL 2 BASIC10.34□□□□□ -0.75
NPIPA3F8WFD2 RIC3-204ENST00000419822 1300 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 OXNAD1-209ENST00000627468 3983 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 SGK3-202ENST00000396596 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 CCNYL2-201ENST00000472090 1440 ntBASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 HNRNPUL1-202ENST00000352456 3426 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 CDC37L1-201ENST00000381854 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 ZNF461-204ENST00000588268 2584 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 ICA1L-222ENST00000617388 8151 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 AMER3-201ENST00000321420 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 ADGRE2-206ENST00000594294 2325 ntTSL 5 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 IGHMBP2-201ENST00000255078 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 WIPF2-201ENST00000323571 7474 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 TP53-218ENST00000610292 2639 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 NR1I2-201ENST00000337940 2743 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 GALNT11-208ENST00000434507 2747 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
NPIPA3F8WFD2 TDRD3-201ENST00000196169 3019 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms