Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RPS8-202ENST00000396651 881 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 DNM1P48-201ENST00000419538 439 ntBASIC11.98□□□□□ -0.49
LMO3Q8TAP4 LINC01517-201ENST00000426922 980 ntTSL 5 BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 RPSAP11-201ENST00000443010 881 ntBASIC11.98□□□□□ -0.49
LMO3Q8TAP4 AP001065.1-201ENST00000449713 912 ntTSL 3 BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 ATP5G1-204ENST00000503641 539 ntTSL 3 BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 AC087441.1-201ENST00000531069 301 ntBASIC11.98□□□□□ -0.49
LMO3Q8TAP4 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 AL160291.1-201ENST00000574842 1002 ntTSL 2 BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 B9D1-213ENST00000575403 928 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 AC015688.3-201ENST00000579001 942 ntBASIC11.98□□□□□ -0.49
LMO3Q8TAP4 AP001180.5-201ENST00000581948 730 ntBASIC11.98□□□□□ -0.49
LMO3Q8TAP4 AL359747.1-202ENST00000606028 918 ntBASIC11.98□□□□□ -0.49
LMO3Q8TAP4 Metazoa_SRP.56-201ENST00000612077 279 ntBASIC11.98□□□□□ -0.49
LMO3Q8TAP4 AC134879.3-201ENST00000614446 254 ntBASIC11.98□□□□□ -0.49
LMO3Q8TAP4 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 AC010325.1-203ENST00000636757 380 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 CARS-216ENST00000639317 135 ntTSL 5 BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 AC068896.1-201ENST00000494792 3422 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 GRAMD2A-201ENST00000309731 3281 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 AC010969.2-201ENST00000602458 3231 ntBASIC11.98□□□□□ -0.49
LMO3Q8TAP4 ZNF529-201ENST00000334116 5238 ntTSL 2 BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 TBCEL-202ENST00000422003 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 SH3BGRL2-201ENST00000369838 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 REEP1-201ENST00000165698 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 NSL1-202ENST00000366977 2317 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 DHX35-202ENST00000373323 2347 ntTSL 2 BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 ST13-201ENST00000216218 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 NPAP1P6-201ENST00000440671 3484 ntBASIC11.98□□□□□ -0.49
LMO3Q8TAP4 DIAPH3-205ENST00000400324 4804 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LMO3Q8TAP4 ZSCAN5A-214ENST00000592355 1813 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 KLK2-201ENST00000325321 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 SPOP-202ENST00000393328 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 RHD-201ENST00000328664 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 AC022113.1-201ENST00000499131 1674 ntTSL 2 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 ASS1-201ENST00000352480 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 ZNF876P-201ENST00000356347 2598 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 SLC38A1-210ENST00000552197 2599 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 C14orf159-204ENST00000428926 2538 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 SRSF7-201ENST00000313117 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 AIRN-202ENST00000609176 1489 ntTSL 5 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 EEF1A1-201ENST00000309268 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 AL365181.2-201ENST00000606343 3222 ntBASIC11.97□□□□□ -0.49
LMO3Q8TAP4 SLC28A1-202ENST00000338602 1360 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 NUDT7-201ENST00000268533 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 GSTA4-201ENST00000370959 793 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 TPTE2P5-201ENST00000379515 450 ntTSL 5 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 TROAP-202ENST00000380327 675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 RPLP0P6-201ENST00000394878 954 ntBASIC11.97□□□□□ -0.49
LMO3Q8TAP4 GNLY-202ENST00000409696 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 ANKRD20A11P-205ENST00000442192 920 ntTSL 3 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 ZNF277-206ENST00000450657 1075 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 AL031432.1-201ENST00000455902 988 ntTSL 3 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 LAIR1-217ENST00000474878 814 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 RN7SL668P-201ENST00000493933 303 ntBASIC11.97□□□□□ -0.49
LMO3Q8TAP4 RPSAP71-201ENST00000522496 872 ntBASIC11.97□□□□□ -0.49
LMO3Q8TAP4 STX17-AS1-201ENST00000529965 548 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 AC021439.1-201ENST00000562975 591 ntTSL 4 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 NUDT7-205ENST00000564085 899 ntTSL 2 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 MCRIP2P2-201ENST00000605276 209 ntBASIC11.97□□□□□ -0.49
LMO3Q8TAP4 NUDT7-207ENST00000613075 1073 ntTSL 3 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 FAM25BP-201ENST00000623997 268 ntBASIC11.97□□□□□ -0.49
LMO3Q8TAP4 NSL1-206ENST00000626725 790 ntTSL 2 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 AC006453.2-201ENST00000636531 1196 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 AC093525.6-201ENST00000563449 2001 ntBASIC11.97□□□□□ -0.49
LMO3Q8TAP4 THRIL-201ENST00000627370 1977 ntBASIC11.97□□□□□ -0.49
LMO3Q8TAP4 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 SEC14L1-212ENST00000585618 2712 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 CBL-203ENST00000634586 3457 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 CTSC-201ENST00000227266 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 ARHGAP36-206ENST00000639280 2685 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 CYP1A1-202ENST00000395048 2608 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 RPL4-215ENST00000568588 1864 ntTSL 2 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 TOPORS-201ENST00000360538 4098 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 AC093802.1-201ENST00000407524 3238 ntTSL 2 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 SOX9-201ENST00000245479 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 TCP11L2-202ENST00000546625 3198 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 PAK1-202ENST00000356341 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 ARHGEF4-201ENST00000326016 3666 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 ZMYND11-201ENST00000309776 4228 ntTSL 2 BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 EPM2A-217ENST00000639423 2886 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO3Q8TAP4 TRIM29-201ENST00000341846 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 RCBTB2-201ENST00000344532 3232 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 AP003355.2-201ENST00000605923 2622 ntBASIC11.96□□□□□ -0.49
LMO3Q8TAP4 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 ECM1-201ENST00000346569 1444 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 NTNG1-205ENST00000370068 4034 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 SRSF10-203ENST00000343255 2917 ntAPPRIS ALT1 TSL 2 BASIC11.96□□□□□ -0.49
LMO3Q8TAP4 ACBD7-201ENST00000356189 1322 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms