Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SCN10AQ9Y5Y9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SCN10AQ9Y5Y9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.55■■□□□ 1.36
SCN10AQ9Y5Y9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.55■■□□□ 1.36
SCN10AQ9Y5Y9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCN10AQ9Y5Y9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCN10AQ9Y5Y9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
SCN10AQ9Y5Y9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCN10AQ9Y5Y9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCN10AQ9Y5Y9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCN10AQ9Y5Y9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.54■■□□□ 1.36
SCN10AQ9Y5Y9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.54■■□□□ 1.36
SCN10AQ9Y5Y9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCN10AQ9Y5Y9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.54■■□□□ 1.36
SCN10AQ9Y5Y9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCN10AQ9Y5Y9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCN10AQ9Y5Y9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCN10AQ9Y5Y9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCN10AQ9Y5Y9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
SCN10AQ9Y5Y9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.54■■□□□ 1.36
SCN10AQ9Y5Y9 AC098590.1-201ENST00000468126 897 ntBASIC23.54■■□□□ 1.36
SCN10AQ9Y5Y9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.54■■□□□ 1.36
SCN10AQ9Y5Y9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SCN10AQ9Y5Y9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.54■■□□□ 1.36
SCN10AQ9Y5Y9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.54■■□□□ 1.36
SCN10AQ9Y5Y9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.53■■□□□ 1.36
SCN10AQ9Y5Y9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SCN10AQ9Y5Y9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.53■■□□□ 1.36
SCN10AQ9Y5Y9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.53■■□□□ 1.36
SCN10AQ9Y5Y9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
SCN10AQ9Y5Y9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SCN10AQ9Y5Y9 AC120498.10-201ENST00000621827 505 ntBASIC23.53■■□□□ 1.36
SCN10AQ9Y5Y9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SCN10AQ9Y5Y9 PRORSD1P-201ENST00000295112 541 ntBASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 DUSP5P2-201ENST00000426873 1033 ntBASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 AC243732.1-201ENST00000612648 864 ntBASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 RARRES2P4-201ENST00000514074 484 ntBASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SCN10AQ9Y5Y9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCN10AQ9Y5Y9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCN10AQ9Y5Y9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
SCN10AQ9Y5Y9 AC091874.3-201ENST00000512672 1195 ntBASIC23.51■■□□□ 1.35
SCN10AQ9Y5Y9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SCN10AQ9Y5Y9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SCN10AQ9Y5Y9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
SCN10AQ9Y5Y9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCN10AQ9Y5Y9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.51■■□□□ 1.35
SCN10AQ9Y5Y9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SCN10AQ9Y5Y9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
SCN10AQ9Y5Y9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.51■■□□□ 1.35
SCN10AQ9Y5Y9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCN10AQ9Y5Y9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.5■■□□□ 1.35
SCN10AQ9Y5Y9 AC010980.2-201ENST00000587099 1412 ntBASIC23.5■■□□□ 1.35
SCN10AQ9Y5Y9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCN10AQ9Y5Y9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.5■■□□□ 1.35
SCN10AQ9Y5Y9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.5■■□□□ 1.35
SCN10AQ9Y5Y9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCN10AQ9Y5Y9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCN10AQ9Y5Y9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCN10AQ9Y5Y9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.5■■□□□ 1.35
SCN10AQ9Y5Y9 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.5■■□□□ 1.35
SCN10AQ9Y5Y9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SCN10AQ9Y5Y9 AC008694.1-202ENST00000636953 945 ntBASIC23.5■■□□□ 1.35
SCN10AQ9Y5Y9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCN10AQ9Y5Y9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.5■■□□□ 1.35
SCN10AQ9Y5Y9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SCN10AQ9Y5Y9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.5■■□□□ 1.35
SCN10AQ9Y5Y9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCN10AQ9Y5Y9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SCN10AQ9Y5Y9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.49■■□□□ 1.35
SCN10AQ9Y5Y9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.49■■□□□ 1.35
SCN10AQ9Y5Y9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
SCN10AQ9Y5Y9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCN10AQ9Y5Y9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCN10AQ9Y5Y9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCN10AQ9Y5Y9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCN10AQ9Y5Y9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.49■■□□□ 1.35
SCN10AQ9Y5Y9 RPS2P52-201ENST00000469610 820 ntBASIC23.49■■□□□ 1.35
SCN10AQ9Y5Y9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCN10AQ9Y5Y9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SCN10AQ9Y5Y9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SCN10AQ9Y5Y9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.48■■□□□ 1.35
SCN10AQ9Y5Y9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
SCN10AQ9Y5Y9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SCN10AQ9Y5Y9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms