Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAI2Q9Y5P3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAI2Q9Y5P3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RAI2Q9Y5P3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAI2Q9Y5P3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAI2Q9Y5P3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAI2Q9Y5P3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAI2Q9Y5P3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAI2Q9Y5P3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RAI2Q9Y5P3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAI2Q9Y5P3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAI2Q9Y5P3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAI2Q9Y5P3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.54■■□□□ 1.04
RAI2Q9Y5P3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAI2Q9Y5P3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
RAI2Q9Y5P3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.54■■□□□ 1.04
RAI2Q9Y5P3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAI2Q9Y5P3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAI2Q9Y5P3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAI2Q9Y5P3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAI2Q9Y5P3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RAI2Q9Y5P3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAI2Q9Y5P3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAI2Q9Y5P3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
RAI2Q9Y5P3 HLA-L-209ENST00000420110 1011 ntBASIC21.53■■□□□ 1.04
RAI2Q9Y5P3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RAI2Q9Y5P3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.53■■□□□ 1.04
RAI2Q9Y5P3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.53■■□□□ 1.04
RAI2Q9Y5P3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.53■■□□□ 1.04
RAI2Q9Y5P3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAI2Q9Y5P3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.53■■□□□ 1.04
RAI2Q9Y5P3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAI2Q9Y5P3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAI2Q9Y5P3 AC010542.4-201ENST00000563151 1910 ntBASIC21.53■■□□□ 1.04
RAI2Q9Y5P3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAI2Q9Y5P3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RAI2Q9Y5P3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAI2Q9Y5P3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAI2Q9Y5P3 AC003102.1-202ENST00000563394 1796 ntBASIC21.52■■□□□ 1.04
RAI2Q9Y5P3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAI2Q9Y5P3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAI2Q9Y5P3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.52■■□□□ 1.04
RAI2Q9Y5P3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.52■■□□□ 1.04
RAI2Q9Y5P3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
RAI2Q9Y5P3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.51■■□□□ 1.03
RAI2Q9Y5P3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.51■■□□□ 1.03
RAI2Q9Y5P3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAI2Q9Y5P3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.51■■□□□ 1.03
RAI2Q9Y5P3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.51■■□□□ 1.03
RAI2Q9Y5P3 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.51■■□□□ 1.03
RAI2Q9Y5P3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.51■■□□□ 1.03
RAI2Q9Y5P3 AC079140.4-201ENST00000507448 529 ntBASIC21.51■■□□□ 1.03
RAI2Q9Y5P3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAI2Q9Y5P3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.51■■□□□ 1.03
RAI2Q9Y5P3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAI2Q9Y5P3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.51■■□□□ 1.03
RAI2Q9Y5P3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAI2Q9Y5P3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAI2Q9Y5P3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAI2Q9Y5P3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
RAI2Q9Y5P3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RAI2Q9Y5P3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAI2Q9Y5P3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAI2Q9Y5P3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAI2Q9Y5P3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RAI2Q9Y5P3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.5■■□□□ 1.03
RAI2Q9Y5P3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAI2Q9Y5P3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAI2Q9Y5P3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAI2Q9Y5P3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.5■■□□□ 1.03
RAI2Q9Y5P3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAI2Q9Y5P3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
RAI2Q9Y5P3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.49■■□□□ 1.03
RAI2Q9Y5P3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.49■■□□□ 1.03
RAI2Q9Y5P3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.49■■□□□ 1.03
RAI2Q9Y5P3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAI2Q9Y5P3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAI2Q9Y5P3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.49■■□□□ 1.03
RAI2Q9Y5P3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.49■■□□□ 1.03
RAI2Q9Y5P3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.49■■□□□ 1.03
RAI2Q9Y5P3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAI2Q9Y5P3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAI2Q9Y5P3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RAI2Q9Y5P3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAI2Q9Y5P3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.48■■□□□ 1.03
RAI2Q9Y5P3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAI2Q9Y5P3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.48■■□□□ 1.03
RAI2Q9Y5P3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.48■■□□□ 1.03
RAI2Q9Y5P3 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.48■■□□□ 1.03
RAI2Q9Y5P3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.48■■□□□ 1.03
RAI2Q9Y5P3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.48■■□□□ 1.03
RAI2Q9Y5P3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAI2Q9Y5P3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.48■■□□□ 1.03
RAI2Q9Y5P3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RAI2Q9Y5P3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAI2Q9Y5P3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.48■■□□□ 1.03
RAI2Q9Y5P3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
RAI2Q9Y5P3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAI2Q9Y5P3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAI2Q9Y5P3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms