Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.68■□□□□ 0.9
TRAF6Q9Y4K3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAF6Q9Y4K3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAF6Q9Y4K3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TRAF6Q9Y4K3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAF6Q9Y4K3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAF6Q9Y4K3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAF6Q9Y4K3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAF6Q9Y4K3 AL121603.2-201ENST00000557373 2117 ntBASIC20.68■□□□□ 0.9
TRAF6Q9Y4K3 AP004607.7-201ENST00000527152 1677 ntBASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 AC003102.1-202ENST00000563394 1796 ntBASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 AC073130.3-201ENST00000624389 2278 ntBASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF6Q9Y4K3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF6Q9Y4K3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF6Q9Y4K3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.66■□□□□ 0.9
TRAF6Q9Y4K3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRAF6Q9Y4K3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF6Q9Y4K3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAF6Q9Y4K3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF6Q9Y4K3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF6Q9Y4K3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF6Q9Y4K3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF6Q9Y4K3 AL157384.1-201ENST00000445995 2473 ntBASIC20.66■□□□□ 0.9
TRAF6Q9Y4K3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF6Q9Y4K3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF6Q9Y4K3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAF6Q9Y4K3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAF6Q9Y4K3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAF6Q9Y4K3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
TRAF6Q9Y4K3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAF6Q9Y4K3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAF6Q9Y4K3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAF6Q9Y4K3 SERBP1P1-201ENST00000396021 1160 ntBASIC20.65■□□□□ 0.9
TRAF6Q9Y4K3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRAF6Q9Y4K3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAF6Q9Y4K3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAF6Q9Y4K3 AL138724.1-201ENST00000606771 1088 ntBASIC20.65■□□□□ 0.9
TRAF6Q9Y4K3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAF6Q9Y4K3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAF6Q9Y4K3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.64■□□□□ 0.9
TRAF6Q9Y4K3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRAF6Q9Y4K3 SYT6-210ENST00000641643 1587 ntBASIC20.64■□□□□ 0.9
TRAF6Q9Y4K3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TRAF6Q9Y4K3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.64■□□□□ 0.89
TRAF6Q9Y4K3 AP005435.1-201ENST00000529293 1178 ntBASIC20.64■□□□□ 0.89
TRAF6Q9Y4K3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAF6Q9Y4K3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAF6Q9Y4K3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAF6Q9Y4K3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF6Q9Y4K3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF6Q9Y4K3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF6Q9Y4K3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF6Q9Y4K3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF6Q9Y4K3 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.63■□□□□ 0.89
TRAF6Q9Y4K3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.63■□□□□ 0.89
TRAF6Q9Y4K3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TRAF6Q9Y4K3 AL049796.1-201ENST00000565336 1766 ntBASIC20.63■□□□□ 0.89
TRAF6Q9Y4K3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF6Q9Y4K3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TRAF6Q9Y4K3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.63■□□□□ 0.89
TRAF6Q9Y4K3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF6Q9Y4K3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF6Q9Y4K3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.63■□□□□ 0.89
TRAF6Q9Y4K3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF6Q9Y4K3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF6Q9Y4K3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF6Q9Y4K3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF6Q9Y4K3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAF6Q9Y4K3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
TRAF6Q9Y4K3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
TRAF6Q9Y4K3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF6Q9Y4K3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.62■□□□□ 0.89
TRAF6Q9Y4K3 DUX4L19-201ENST00000557448 1267 ntBASIC20.62■□□□□ 0.89
TRAF6Q9Y4K3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF6Q9Y4K3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAF6Q9Y4K3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.62■□□□□ 0.89
TRAF6Q9Y4K3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.62■□□□□ 0.89
TRAF6Q9Y4K3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.62■□□□□ 0.89
TRAF6Q9Y4K3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF6Q9Y4K3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.62■□□□□ 0.89
TRAF6Q9Y4K3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF6Q9Y4K3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
TRAF6Q9Y4K3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF6Q9Y4K3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms