Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.39■■□□□ 1.01
TCAF1Q9Y4C2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.39■■□□□ 1.01
TCAF1Q9Y4C2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TCAF1Q9Y4C2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TCAF1Q9Y4C2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TCAF1Q9Y4C2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TCAF1Q9Y4C2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TCAF1Q9Y4C2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.38■■□□□ 1.01
TCAF1Q9Y4C2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TCAF1Q9Y4C2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.38■■□□□ 1.01
TCAF1Q9Y4C2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TCAF1Q9Y4C2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TCAF1Q9Y4C2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.38■■□□□ 1.01
TCAF1Q9Y4C2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.38■■□□□ 1.01
TCAF1Q9Y4C2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.38■■□□□ 1.01
TCAF1Q9Y4C2 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.38■■□□□ 1.01
TCAF1Q9Y4C2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.38■■□□□ 1.01
TCAF1Q9Y4C2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.38■■□□□ 1.01
TCAF1Q9Y4C2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.38■■□□□ 1.01
TCAF1Q9Y4C2 AC009237.3-201ENST00000393279 1427 ntBASIC21.38■■□□□ 1.01
TCAF1Q9Y4C2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.37■■□□□ 1.01
TCAF1Q9Y4C2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCAF1Q9Y4C2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCAF1Q9Y4C2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
TCAF1Q9Y4C2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCAF1Q9Y4C2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.37■■□□□ 1.01
TCAF1Q9Y4C2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.37■■□□□ 1.01
TCAF1Q9Y4C2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCAF1Q9Y4C2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCAF1Q9Y4C2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.37■■□□□ 1.01
TCAF1Q9Y4C2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCAF1Q9Y4C2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.37■■□□□ 1.01
TCAF1Q9Y4C2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCAF1Q9Y4C2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
TCAF1Q9Y4C2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCAF1Q9Y4C2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCAF1Q9Y4C2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCAF1Q9Y4C2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.36■■□□□ 1.01
TCAF1Q9Y4C2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.36■■□□□ 1.01
TCAF1Q9Y4C2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TCAF1Q9Y4C2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCAF1Q9Y4C2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCAF1Q9Y4C2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
TCAF1Q9Y4C2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TCAF1Q9Y4C2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TCAF1Q9Y4C2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.35■■□□□ 1.01
TCAF1Q9Y4C2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TCAF1Q9Y4C2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.35■■□□□ 1.01
TCAF1Q9Y4C2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TCAF1Q9Y4C2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
TCAF1Q9Y4C2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TCAF1Q9Y4C2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TCAF1Q9Y4C2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 FEM1AP4-201ENST00000443167 1987 ntBASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 AC142381.2-201ENST00000566120 298 ntBASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 AC055733.4-201ENST00000638462 1354 ntBASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 BX005040.4-201ENST00000637145 1518 ntBASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCAF1Q9Y4C2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TCAF1Q9Y4C2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TCAF1Q9Y4C2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TCAF1Q9Y4C2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TCAF1Q9Y4C2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TCAF1Q9Y4C2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.33■■□□□ 1.01
TCAF1Q9Y4C2 AC005229.4-201ENST00000610085 2198 ntBASIC21.33■■□□□ 1.01
TCAF1Q9Y4C2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.33■■□□□ 1.01
TCAF1Q9Y4C2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TCAF1Q9Y4C2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.33■■□□□ 1
TCAF1Q9Y4C2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.33■■□□□ 1
TCAF1Q9Y4C2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.33■■□□□ 1
TCAF1Q9Y4C2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TCAF1Q9Y4C2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
TCAF1Q9Y4C2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.32■■□□□ 1
TCAF1Q9Y4C2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TCAF1Q9Y4C2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.32■■□□□ 1
TCAF1Q9Y4C2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TCAF1Q9Y4C2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.32■■□□□ 1
TCAF1Q9Y4C2 AC005224.4-201ENST00000583262 1652 ntBASIC21.32■■□□□ 1
TCAF1Q9Y4C2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.32■■□□□ 1
TCAF1Q9Y4C2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TCAF1Q9Y4C2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TCAF1Q9Y4C2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.32■■□□□ 1
TCAF1Q9Y4C2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.32■■□□□ 1
TCAF1Q9Y4C2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TCAF1Q9Y4C2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms