Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EXOSC1Q9Y3B2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19■□□□□ 0.63
EXOSC1Q9Y3B2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EXOSC1Q9Y3B2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19■□□□□ 0.63
EXOSC1Q9Y3B2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19■□□□□ 0.63
EXOSC1Q9Y3B2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EXOSC1Q9Y3B2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19■□□□□ 0.63
EXOSC1Q9Y3B2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19■□□□□ 0.63
EXOSC1Q9Y3B2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19■□□□□ 0.63
EXOSC1Q9Y3B2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EXOSC1Q9Y3B2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19■□□□□ 0.63
EXOSC1Q9Y3B2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EXOSC1Q9Y3B2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19■□□□□ 0.63
EXOSC1Q9Y3B2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19■□□□□ 0.63
EXOSC1Q9Y3B2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19■□□□□ 0.63
EXOSC1Q9Y3B2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
EXOSC1Q9Y3B2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19■□□□□ 0.63
EXOSC1Q9Y3B2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EXOSC1Q9Y3B2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
EXOSC1Q9Y3B2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
EXOSC1Q9Y3B2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EXOSC1Q9Y3B2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.99■□□□□ 0.63
EXOSC1Q9Y3B2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EXOSC1Q9Y3B2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EXOSC1Q9Y3B2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
EXOSC1Q9Y3B2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.99■□□□□ 0.63
EXOSC1Q9Y3B2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.99■□□□□ 0.63
EXOSC1Q9Y3B2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.99■□□□□ 0.63
EXOSC1Q9Y3B2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.99■□□□□ 0.63
EXOSC1Q9Y3B2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.99■□□□□ 0.63
EXOSC1Q9Y3B2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EXOSC1Q9Y3B2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
EXOSC1Q9Y3B2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
EXOSC1Q9Y3B2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
EXOSC1Q9Y3B2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EXOSC1Q9Y3B2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 AC092028.1-203ENST00000608262 953 ntBASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 AC068587.7-201ENST00000641602 218 ntBASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EXOSC1Q9Y3B2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
EXOSC1Q9Y3B2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
EXOSC1Q9Y3B2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
EXOSC1Q9Y3B2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.97■□□□□ 0.63
EXOSC1Q9Y3B2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.97■□□□□ 0.63
EXOSC1Q9Y3B2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EXOSC1Q9Y3B2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
EXOSC1Q9Y3B2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.97■□□□□ 0.63
EXOSC1Q9Y3B2 MTDHP2-201ENST00000601468 714 ntBASIC18.97■□□□□ 0.63
EXOSC1Q9Y3B2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
EXOSC1Q9Y3B2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.97■□□□□ 0.63
EXOSC1Q9Y3B2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.97■□□□□ 0.63
EXOSC1Q9Y3B2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
EXOSC1Q9Y3B2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EXOSC1Q9Y3B2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.97■□□□□ 0.63
EXOSC1Q9Y3B2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
EXOSC1Q9Y3B2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EXOSC1Q9Y3B2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
EXOSC1Q9Y3B2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EXOSC1Q9Y3B2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
EXOSC1Q9Y3B2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EXOSC1Q9Y3B2 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.96■□□□□ 0.63
EXOSC1Q9Y3B2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
EXOSC1Q9Y3B2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.96■□□□□ 0.63
EXOSC1Q9Y3B2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
EXOSC1Q9Y3B2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.96■□□□□ 0.63
EXOSC1Q9Y3B2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
EXOSC1Q9Y3B2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.96■□□□□ 0.63
EXOSC1Q9Y3B2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
EXOSC1Q9Y3B2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
EXOSC1Q9Y3B2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EXOSC1Q9Y3B2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
EXOSC1Q9Y3B2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.96■□□□□ 0.63
EXOSC1Q9Y3B2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EXOSC1Q9Y3B2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 GABARAPL3-202ENST00000624044 1851 ntBASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms