Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MRPS28Q9Y2Q9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MRPS28Q9Y2Q9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.28■□□□□ 0.52
MRPS28Q9Y2Q9 SRD5A1P1-201ENST00000442297 786 ntBASIC18.28■□□□□ 0.52
MRPS28Q9Y2Q9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.28■□□□□ 0.52
MRPS28Q9Y2Q9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.28■□□□□ 0.52
MRPS28Q9Y2Q9 AC092171.4-201ENST00000609130 632 ntBASIC18.28■□□□□ 0.52
MRPS28Q9Y2Q9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MRPS28Q9Y2Q9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.28■□□□□ 0.52
MRPS28Q9Y2Q9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.28■□□□□ 0.52
MRPS28Q9Y2Q9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
MRPS28Q9Y2Q9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MRPS28Q9Y2Q9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MRPS28Q9Y2Q9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MRPS28Q9Y2Q9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MRPS28Q9Y2Q9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MRPS28Q9Y2Q9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MRPS28Q9Y2Q9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
MRPS28Q9Y2Q9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.27■□□□□ 0.52
MRPS28Q9Y2Q9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
MRPS28Q9Y2Q9 OXCT2P1-201ENST00000447263 1535 ntBASIC18.27■□□□□ 0.51
MRPS28Q9Y2Q9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.27■□□□□ 0.51
MRPS28Q9Y2Q9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MRPS28Q9Y2Q9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
MRPS28Q9Y2Q9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MRPS28Q9Y2Q9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.27■□□□□ 0.51
MRPS28Q9Y2Q9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
MRPS28Q9Y2Q9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
MRPS28Q9Y2Q9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 AL034346.1-201ENST00000568244 1277 ntBASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 MIR3621-201ENST00000580529 85 ntBASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 AC010525.1-201ENST00000585559 441 ntBASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 SLC25A24-204ENST00000569674 2357 ntBASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MRPS28Q9Y2Q9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MRPS28Q9Y2Q9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MRPS28Q9Y2Q9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MRPS28Q9Y2Q9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MRPS28Q9Y2Q9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
MRPS28Q9Y2Q9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MRPS28Q9Y2Q9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.25■□□□□ 0.51
MRPS28Q9Y2Q9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MRPS28Q9Y2Q9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.25■□□□□ 0.51
MRPS28Q9Y2Q9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MRPS28Q9Y2Q9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MRPS28Q9Y2Q9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
MRPS28Q9Y2Q9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
MRPS28Q9Y2Q9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.24■□□□□ 0.51
MRPS28Q9Y2Q9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MRPS28Q9Y2Q9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.24■□□□□ 0.51
MRPS28Q9Y2Q9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MRPS28Q9Y2Q9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
MRPS28Q9Y2Q9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.24■□□□□ 0.51
MRPS28Q9Y2Q9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.24■□□□□ 0.51
MRPS28Q9Y2Q9 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.24■□□□□ 0.51
MRPS28Q9Y2Q9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.24■□□□□ 0.51
MRPS28Q9Y2Q9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MRPS28Q9Y2Q9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MRPS28Q9Y2Q9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.22■□□□□ 0.51
MRPS28Q9Y2Q9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MRPS28Q9Y2Q9 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.22■□□□□ 0.51
MRPS28Q9Y2Q9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
MRPS28Q9Y2Q9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.22■□□□□ 0.51
MRPS28Q9Y2Q9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.22■□□□□ 0.51
MRPS28Q9Y2Q9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms