Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
COPS3Q9UNS2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPS3Q9UNS2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.92■□□□□ 0.62
COPS3Q9UNS2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.92■□□□□ 0.62
COPS3Q9UNS2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COPS3Q9UNS2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPS3Q9UNS2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPS3Q9UNS2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COPS3Q9UNS2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPS3Q9UNS2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COPS3Q9UNS2 GUSBP5-201ENST00000418136 578 ntBASIC18.91■□□□□ 0.62
COPS3Q9UNS2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPS3Q9UNS2 AC010141.3-201ENST00000456659 717 ntBASIC18.91■□□□□ 0.62
COPS3Q9UNS2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COPS3Q9UNS2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
COPS3Q9UNS2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.91■□□□□ 0.62
COPS3Q9UNS2 AC073130.3-201ENST00000624389 2278 ntBASIC18.91■□□□□ 0.62
COPS3Q9UNS2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
COPS3Q9UNS2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COPS3Q9UNS2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.91■□□□□ 0.62
COPS3Q9UNS2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
COPS3Q9UNS2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.91■□□□□ 0.62
COPS3Q9UNS2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPS3Q9UNS2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPS3Q9UNS2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPS3Q9UNS2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COPS3Q9UNS2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COPS3Q9UNS2 AL157384.1-201ENST00000445995 2473 ntBASIC18.9■□□□□ 0.62
COPS3Q9UNS2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.9■□□□□ 0.62
COPS3Q9UNS2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COPS3Q9UNS2 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.9■□□□□ 0.62
COPS3Q9UNS2 AL512631.2-201ENST00000604634 923 ntBASIC18.9■□□□□ 0.62
COPS3Q9UNS2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.9■□□□□ 0.62
COPS3Q9UNS2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPS3Q9UNS2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
COPS3Q9UNS2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPS3Q9UNS2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPS3Q9UNS2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPS3Q9UNS2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
COPS3Q9UNS2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPS3Q9UNS2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
COPS3Q9UNS2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COPS3Q9UNS2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
COPS3Q9UNS2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.89■□□□□ 0.61
COPS3Q9UNS2 SRD5A1P1-201ENST00000442297 786 ntBASIC18.89■□□□□ 0.61
COPS3Q9UNS2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COPS3Q9UNS2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.89■□□□□ 0.61
COPS3Q9UNS2 AC087239.1-201ENST00000622671 572 ntBASIC18.89■□□□□ 0.61
COPS3Q9UNS2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COPS3Q9UNS2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COPS3Q9UNS2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
COPS3Q9UNS2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.89■□□□□ 0.61
COPS3Q9UNS2 OXCT2P1-201ENST00000447263 1535 ntBASIC18.89■□□□□ 0.61
COPS3Q9UNS2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
COPS3Q9UNS2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COPS3Q9UNS2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COPS3Q9UNS2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COPS3Q9UNS2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.88■□□□□ 0.61
COPS3Q9UNS2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COPS3Q9UNS2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.88■□□□□ 0.61
COPS3Q9UNS2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPS3Q9UNS2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.88■□□□□ 0.61
COPS3Q9UNS2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPS3Q9UNS2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
COPS3Q9UNS2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPS3Q9UNS2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
COPS3Q9UNS2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPS3Q9UNS2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPS3Q9UNS2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPS3Q9UNS2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPS3Q9UNS2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPS3Q9UNS2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COPS3Q9UNS2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPS3Q9UNS2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.87■□□□□ 0.61
COPS3Q9UNS2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
COPS3Q9UNS2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
COPS3Q9UNS2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPS3Q9UNS2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPS3Q9UNS2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
COPS3Q9UNS2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
COPS3Q9UNS2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPS3Q9UNS2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPS3Q9UNS2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.86■□□□□ 0.61
COPS3Q9UNS2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPS3Q9UNS2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPS3Q9UNS2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPS3Q9UNS2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COPS3Q9UNS2 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.86■□□□□ 0.61
COPS3Q9UNS2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COPS3Q9UNS2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
COPS3Q9UNS2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPS3Q9UNS2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPS3Q9UNS2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
COPS3Q9UNS2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COPS3Q9UNS2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
COPS3Q9UNS2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COPS3Q9UNS2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COPS3Q9UNS2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPS3Q9UNS2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
COPS3Q9UNS2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms