Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NIPSNAP3AQ9UFN0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.26■□□□□ 0.83
NIPSNAP3AQ9UFN0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NIPSNAP3AQ9UFN0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.26■□□□□ 0.83
NIPSNAP3AQ9UFN0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NIPSNAP3AQ9UFN0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NIPSNAP3AQ9UFN0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.26■□□□□ 0.83
NIPSNAP3AQ9UFN0 AC087239.1-201ENST00000622671 572 ntBASIC20.26■□□□□ 0.83
NIPSNAP3AQ9UFN0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NIPSNAP3AQ9UFN0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.26■□□□□ 0.83
NIPSNAP3AQ9UFN0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NIPSNAP3AQ9UFN0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.26■□□□□ 0.83
NIPSNAP3AQ9UFN0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NIPSNAP3AQ9UFN0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NIPSNAP3AQ9UFN0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.25■□□□□ 0.83
NIPSNAP3AQ9UFN0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NIPSNAP3AQ9UFN0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NIPSNAP3AQ9UFN0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPSNAP3AQ9UFN0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NIPSNAP3AQ9UFN0 KRT16P3-201ENST00000439127 1283 ntBASIC20.25■□□□□ 0.83
NIPSNAP3AQ9UFN0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.25■□□□□ 0.83
NIPSNAP3AQ9UFN0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.25■□□□□ 0.83
NIPSNAP3AQ9UFN0 AC068587.7-201ENST00000641602 218 ntBASIC20.25■□□□□ 0.83
NIPSNAP3AQ9UFN0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPSNAP3AQ9UFN0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.25■□□□□ 0.83
NIPSNAP3AQ9UFN0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPSNAP3AQ9UFN0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.25■□□□□ 0.83
NIPSNAP3AQ9UFN0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPSNAP3AQ9UFN0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPSNAP3AQ9UFN0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
NIPSNAP3AQ9UFN0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.24■□□□□ 0.83
NIPSNAP3AQ9UFN0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPSNAP3AQ9UFN0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPSNAP3AQ9UFN0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NIPSNAP3AQ9UFN0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NIPSNAP3AQ9UFN0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.24■□□□□ 0.83
NIPSNAP3AQ9UFN0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.24■□□□□ 0.83
NIPSNAP3AQ9UFN0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.24■□□□□ 0.83
NIPSNAP3AQ9UFN0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPSNAP3AQ9UFN0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.24■□□□□ 0.83
NIPSNAP3AQ9UFN0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NIPSNAP3AQ9UFN0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPSNAP3AQ9UFN0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPSNAP3AQ9UFN0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NIPSNAP3AQ9UFN0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPSNAP3AQ9UFN0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.23■□□□□ 0.83
NIPSNAP3AQ9UFN0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NIPSNAP3AQ9UFN0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NIPSNAP3AQ9UFN0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NIPSNAP3AQ9UFN0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NIPSNAP3AQ9UFN0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NIPSNAP3AQ9UFN0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.23■□□□□ 0.83
NIPSNAP3AQ9UFN0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.23■□□□□ 0.83
NIPSNAP3AQ9UFN0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.23■□□□□ 0.83
NIPSNAP3AQ9UFN0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.23■□□□□ 0.83
NIPSNAP3AQ9UFN0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.23■□□□□ 0.83
NIPSNAP3AQ9UFN0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NIPSNAP3AQ9UFN0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NIPSNAP3AQ9UFN0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NIPSNAP3AQ9UFN0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.22■□□□□ 0.83
NIPSNAP3AQ9UFN0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
NIPSNAP3AQ9UFN0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NIPSNAP3AQ9UFN0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NIPSNAP3AQ9UFN0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.22■□□□□ 0.83
NIPSNAP3AQ9UFN0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NIPSNAP3AQ9UFN0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.22■□□□□ 0.83
NIPSNAP3AQ9UFN0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NIPSNAP3AQ9UFN0 MIR3181-201ENST00000578512 73 ntBASIC20.22■□□□□ 0.83
NIPSNAP3AQ9UFN0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NIPSNAP3AQ9UFN0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.22■□□□□ 0.83
NIPSNAP3AQ9UFN0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NIPSNAP3AQ9UFN0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NIPSNAP3AQ9UFN0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NIPSNAP3AQ9UFN0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NIPSNAP3AQ9UFN0 AC073130.3-201ENST00000624389 2278 ntBASIC20.22■□□□□ 0.83
NIPSNAP3AQ9UFN0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NIPSNAP3AQ9UFN0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
NIPSNAP3AQ9UFN0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.21■□□□□ 0.83
NIPSNAP3AQ9UFN0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.21■□□□□ 0.83
NIPSNAP3AQ9UFN0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.21■□□□□ 0.83
NIPSNAP3AQ9UFN0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.21■□□□□ 0.83
NIPSNAP3AQ9UFN0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NIPSNAP3AQ9UFN0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.21■□□□□ 0.83
NIPSNAP3AQ9UFN0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.21■□□□□ 0.83
NIPSNAP3AQ9UFN0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NIPSNAP3AQ9UFN0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
NIPSNAP3AQ9UFN0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NIPSNAP3AQ9UFN0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NIPSNAP3AQ9UFN0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NIPSNAP3AQ9UFN0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NIPSNAP3AQ9UFN0 OR2I1P-207ENST00000453522 948 ntBASIC20.2■□□□□ 0.82
NIPSNAP3AQ9UFN0 AC010141.3-201ENST00000456659 717 ntBASIC20.2■□□□□ 0.82
NIPSNAP3AQ9UFN0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.2■□□□□ 0.82
NIPSNAP3AQ9UFN0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NIPSNAP3AQ9UFN0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NIPSNAP3AQ9UFN0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NIPSNAP3AQ9UFN0 AL356740.2-201ENST00000601559 647 ntBASIC20.2■□□□□ 0.82
NIPSNAP3AQ9UFN0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NIPSNAP3AQ9UFN0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.2■□□□□ 0.82
NIPSNAP3AQ9UFN0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms