Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSFQ9UBX1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTSFQ9UBX1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSFQ9UBX1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSFQ9UBX1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSFQ9UBX1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSFQ9UBX1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.05■□□□□ 0.8
CTSFQ9UBX1 AC010141.2-201ENST00000452426 721 ntBASIC20.05■□□□□ 0.8
CTSFQ9UBX1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.05■□□□□ 0.8
CTSFQ9UBX1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.05■□□□□ 0.8
CTSFQ9UBX1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.05■□□□□ 0.8
CTSFQ9UBX1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSFQ9UBX1 MFSD11-216ENST00000590393 1141 ntBASIC20.05■□□□□ 0.8
CTSFQ9UBX1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSFQ9UBX1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTSFQ9UBX1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSFQ9UBX1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.05■□□□□ 0.8
CTSFQ9UBX1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.05■□□□□ 0.8
CTSFQ9UBX1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSFQ9UBX1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSFQ9UBX1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTSFQ9UBX1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSFQ9UBX1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSFQ9UBX1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.04■□□□□ 0.8
CTSFQ9UBX1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CTSFQ9UBX1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.04■□□□□ 0.8
CTSFQ9UBX1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.04■□□□□ 0.8
CTSFQ9UBX1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.04■□□□□ 0.8
CTSFQ9UBX1 AC138907.5-202ENST00000569484 235 ntBASIC20.04■□□□□ 0.8
CTSFQ9UBX1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSFQ9UBX1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSFQ9UBX1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.04■□□□□ 0.8
CTSFQ9UBX1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.03■□□□□ 0.8
CTSFQ9UBX1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTSFQ9UBX1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.03■□□□□ 0.8
CTSFQ9UBX1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CTSFQ9UBX1 AC068473.5-201ENST00000616428 2072 ntBASIC20.03■□□□□ 0.8
CTSFQ9UBX1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.03■□□□□ 0.8
CTSFQ9UBX1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CTSFQ9UBX1 EEF1DP3-203ENST00000566025 782 ntBASIC20.03■□□□□ 0.8
CTSFQ9UBX1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.03■□□□□ 0.8
CTSFQ9UBX1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
CTSFQ9UBX1 AC092053.2-201ENST00000640557 1818 ntBASIC20.03■□□□□ 0.8
CTSFQ9UBX1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.03■□□□□ 0.8
CTSFQ9UBX1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CTSFQ9UBX1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.03■□□□□ 0.8
CTSFQ9UBX1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTSFQ9UBX1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTSFQ9UBX1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTSFQ9UBX1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTSFQ9UBX1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTSFQ9UBX1 AC079834.2-201ENST00000609776 1949 ntBASIC20.02■□□□□ 0.8
CTSFQ9UBX1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTSFQ9UBX1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTSFQ9UBX1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.02■□□□□ 0.8
CTSFQ9UBX1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CTSFQ9UBX1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.02■□□□□ 0.8
CTSFQ9UBX1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.02■□□□□ 0.8
CTSFQ9UBX1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.02■□□□□ 0.8
CTSFQ9UBX1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTSFQ9UBX1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTSFQ9UBX1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTSFQ9UBX1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTSFQ9UBX1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CTSFQ9UBX1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CTSFQ9UBX1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CTSFQ9UBX1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTSFQ9UBX1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.01■□□□□ 0.79
CTSFQ9UBX1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTSFQ9UBX1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTSFQ9UBX1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CTSFQ9UBX1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.01■□□□□ 0.79
CTSFQ9UBX1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.01■□□□□ 0.79
CTSFQ9UBX1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.01■□□□□ 0.79
CTSFQ9UBX1 AC053503.5-201ENST00000601508 636 ntBASIC20.01■□□□□ 0.79
CTSFQ9UBX1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.01■□□□□ 0.79
CTSFQ9UBX1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.01■□□□□ 0.79
CTSFQ9UBX1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20■□□□□ 0.79
CTSFQ9UBX1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CTSFQ9UBX1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
CTSFQ9UBX1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20■□□□□ 0.79
CTSFQ9UBX1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTSFQ9UBX1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CTSFQ9UBX1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTSFQ9UBX1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTSFQ9UBX1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CTSFQ9UBX1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CTSFQ9UBX1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20■□□□□ 0.79
CTSFQ9UBX1 AC026185.1-201ENST00000445748 174 ntBASIC20■□□□□ 0.79
CTSFQ9UBX1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CTSFQ9UBX1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20■□□□□ 0.79
CTSFQ9UBX1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20■□□□□ 0.79
CTSFQ9UBX1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CTSFQ9UBX1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20■□□□□ 0.79
CTSFQ9UBX1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20■□□□□ 0.79
CTSFQ9UBX1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTSFQ9UBX1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CTSFQ9UBX1 MYCNOS-205ENST00000641950 531 ntBASIC20■□□□□ 0.79
CTSFQ9UBX1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTSFQ9UBX1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms