Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRIT1Q9P2V4 CNN2P6-201ENST00000439038 900 ntBASIC20.61■□□□□ 0.89
LRIT1Q9P2V4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.61■□□□□ 0.89
LRIT1Q9P2V4 TSPY6P-201ENST00000448518 926 ntBASIC20.61■□□□□ 0.89
LRIT1Q9P2V4 SLC7A5P2-201ENST00000553010 536 ntBASIC20.61■□□□□ 0.89
LRIT1Q9P2V4 SLC7A5P1-201ENST00000568957 537 ntBASIC20.61■□□□□ 0.89
LRIT1Q9P2V4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRIT1Q9P2V4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
LRIT1Q9P2V4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRIT1Q9P2V4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LRIT1Q9P2V4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.61■□□□□ 0.89
LRIT1Q9P2V4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
LRIT1Q9P2V4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRIT1Q9P2V4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRIT1Q9P2V4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRIT1Q9P2V4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRIT1Q9P2V4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRIT1Q9P2V4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRIT1Q9P2V4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRIT1Q9P2V4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.6■□□□□ 0.89
LRIT1Q9P2V4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRIT1Q9P2V4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRIT1Q9P2V4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.6■□□□□ 0.89
LRIT1Q9P2V4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.6■□□□□ 0.89
LRIT1Q9P2V4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LRIT1Q9P2V4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.6■□□□□ 0.89
LRIT1Q9P2V4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.6■□□□□ 0.89
LRIT1Q9P2V4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.6■□□□□ 0.89
LRIT1Q9P2V4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.6■□□□□ 0.89
LRIT1Q9P2V4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.6■□□□□ 0.89
LRIT1Q9P2V4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRIT1Q9P2V4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRIT1Q9P2V4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRIT1Q9P2V4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRIT1Q9P2V4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LRIT1Q9P2V4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.59■□□□□ 0.89
LRIT1Q9P2V4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRIT1Q9P2V4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
LRIT1Q9P2V4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRIT1Q9P2V4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.59■□□□□ 0.89
LRIT1Q9P2V4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.59■□□□□ 0.89
LRIT1Q9P2V4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRIT1Q9P2V4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRIT1Q9P2V4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRIT1Q9P2V4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRIT1Q9P2V4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRIT1Q9P2V4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRIT1Q9P2V4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRIT1Q9P2V4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
LRIT1Q9P2V4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LRIT1Q9P2V4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
LRIT1Q9P2V4 TERF1P5-201ENST00000477545 1207 ntBASIC20.58■□□□□ 0.89
LRIT1Q9P2V4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRIT1Q9P2V4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.58■□□□□ 0.89
LRIT1Q9P2V4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.58■□□□□ 0.89
LRIT1Q9P2V4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.58■□□□□ 0.89
LRIT1Q9P2V4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRIT1Q9P2V4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRIT1Q9P2V4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRIT1Q9P2V4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.58■□□□□ 0.88
LRIT1Q9P2V4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRIT1Q9P2V4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.58■□□□□ 0.88
LRIT1Q9P2V4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 SLC29A4P1-201ENST00000398760 971 ntBASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 AC142086.2-201ENST00000569753 217 ntBASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 AC008175.2-201ENST00000612840 297 ntBASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 AC120498.10-201ENST00000621827 505 ntBASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 AC013268.1-206ENST00000638368 961 ntBASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 AC112229.1-201ENST00000639295 961 ntBASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT1Q9P2V4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRIT1Q9P2V4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRIT1Q9P2V4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRIT1Q9P2V4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.56■□□□□ 0.88
LRIT1Q9P2V4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRIT1Q9P2V4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.56■□□□□ 0.88
LRIT1Q9P2V4 AF201337.1-201ENST00000520239 748 ntBASIC20.56■□□□□ 0.88
LRIT1Q9P2V4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
LRIT1Q9P2V4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRIT1Q9P2V4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LRIT1Q9P2V4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRIT1Q9P2V4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRIT1Q9P2V4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
LRIT1Q9P2V4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRIT1Q9P2V4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
LRIT1Q9P2V4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRIT1Q9P2V4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms