Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.53■□□□□ 0.88
NDE1Q9NXR1 MIR6722-201ENST00000617286 78 ntBASIC20.53■□□□□ 0.88
NDE1Q9NXR1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDE1Q9NXR1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDE1Q9NXR1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDE1Q9NXR1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.53■□□□□ 0.88
NDE1Q9NXR1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NDE1Q9NXR1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDE1Q9NXR1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDE1Q9NXR1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDE1Q9NXR1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDE1Q9NXR1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.52■□□□□ 0.88
NDE1Q9NXR1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
NDE1Q9NXR1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NDE1Q9NXR1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NDE1Q9NXR1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NDE1Q9NXR1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
NDE1Q9NXR1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
NDE1Q9NXR1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NDE1Q9NXR1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.52■□□□□ 0.88
NDE1Q9NXR1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.52■□□□□ 0.88
NDE1Q9NXR1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.52■□□□□ 0.88
NDE1Q9NXR1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NDE1Q9NXR1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.52■□□□□ 0.88
NDE1Q9NXR1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NDE1Q9NXR1 C17orf82-201ENST00000623772 1530 ntBASIC20.52■□□□□ 0.87
NDE1Q9NXR1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
NDE1Q9NXR1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NDE1Q9NXR1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDE1Q9NXR1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.5■□□□□ 0.87
NDE1Q9NXR1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.5■□□□□ 0.87
NDE1Q9NXR1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDE1Q9NXR1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.5■□□□□ 0.87
NDE1Q9NXR1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NDE1Q9NXR1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDE1Q9NXR1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDE1Q9NXR1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDE1Q9NXR1 RARRES2P2-201ENST00000394842 485 ntBASIC20.5■□□□□ 0.87
NDE1Q9NXR1 DUX4L18-201ENST00000553347 1267 ntBASIC20.5■□□□□ 0.87
NDE1Q9NXR1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
NDE1Q9NXR1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDE1Q9NXR1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDE1Q9NXR1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.5■□□□□ 0.87
NDE1Q9NXR1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDE1Q9NXR1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDE1Q9NXR1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.5■□□□□ 0.87
NDE1Q9NXR1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.49■□□□□ 0.87
NDE1Q9NXR1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
NDE1Q9NXR1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
NDE1Q9NXR1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.49■□□□□ 0.87
NDE1Q9NXR1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
NDE1Q9NXR1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
NDE1Q9NXR1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.49■□□□□ 0.87
NDE1Q9NXR1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NDE1Q9NXR1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NDE1Q9NXR1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NDE1Q9NXR1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NDE1Q9NXR1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NDE1Q9NXR1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
NDE1Q9NXR1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NDE1Q9NXR1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NDE1Q9NXR1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.48■□□□□ 0.87
NDE1Q9NXR1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.48■□□□□ 0.87
NDE1Q9NXR1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NDE1Q9NXR1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.48■□□□□ 0.87
NDE1Q9NXR1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NDE1Q9NXR1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NDE1Q9NXR1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.48■□□□□ 0.87
NDE1Q9NXR1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.48■□□□□ 0.87
NDE1Q9NXR1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NDE1Q9NXR1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.48■□□□□ 0.87
NDE1Q9NXR1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.48■□□□□ 0.87
NDE1Q9NXR1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NDE1Q9NXR1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
NDE1Q9NXR1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
NDE1Q9NXR1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.48■□□□□ 0.87
NDE1Q9NXR1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDE1Q9NXR1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.47■□□□□ 0.87
NDE1Q9NXR1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms