Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 AC034268.1-201ENST00000441047 882 ntBASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 TERF1P2-201ENST00000583350 1212 ntBASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PARPBPQ9NWS1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 AP006587.3-201ENST00000525742 1516 ntBASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 AC026271.2-201ENST00000428091 497 ntBASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 CCDC92B-201ENST00000575506 885 ntBASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 MIR5787-201ENST00000611784 55 ntBASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 AL024507.2-201ENST00000606070 2574 ntBASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.96■□□□□ 0.63
PARPBPQ9NWS1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 AC055733.4-201ENST00000638462 1354 ntBASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 KRT18P14-201ENST00000534205 1250 ntBASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PARPBPQ9NWS1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 AC079140.4-201ENST00000507448 529 ntBASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PARPBPQ9NWS1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms