Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZFYVE1Q9HBF4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.32■■□□□ 1
ZFYVE1Q9HBF4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.32■■□□□ 1
ZFYVE1Q9HBF4 AC034268.1-201ENST00000441047 882 ntBASIC21.32■■□□□ 1
ZFYVE1Q9HBF4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.32■■□□□ 1
ZFYVE1Q9HBF4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.32■■□□□ 1
ZFYVE1Q9HBF4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 DUX4L2-201ENST00000561772 1275 ntBASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 DUX4L6-201ENST00000626483 1275 ntBASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 DUX4L1-201ENST00000627662 1275 ntBASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 DUX4L8-201ENST00000629013 1275 ntBASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 DUX4L3-201ENST00000630187 1275 ntBASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 DUX4L7-201ENST00000630678 1275 ntBASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 DUX4L5-201ENST00000630834 1275 ntBASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE1Q9HBF4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE1Q9HBF4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.3■■□□□ 1
ZFYVE1Q9HBF4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE1Q9HBF4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.3■■□□□ 1
ZFYVE1Q9HBF4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE1Q9HBF4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE1Q9HBF4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE1Q9HBF4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.3■■□□□ 1
ZFYVE1Q9HBF4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.3■■□□□ 1
ZFYVE1Q9HBF4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
ZFYVE1Q9HBF4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE1Q9HBF4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE1Q9HBF4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE1Q9HBF4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.29■■□□□ 1
ZFYVE1Q9HBF4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE1Q9HBF4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE1Q9HBF4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.29■■□□□ 1
ZFYVE1Q9HBF4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.29■■□□□ 1
ZFYVE1Q9HBF4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE1Q9HBF4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.29■■□□□ 1
ZFYVE1Q9HBF4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE1Q9HBF4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE1Q9HBF4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE1Q9HBF4 MIR5787-201ENST00000611784 55 ntBASIC21.29■■□□□ 1
ZFYVE1Q9HBF4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE1Q9HBF4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE1Q9HBF4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE1Q9HBF4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.29■■□□□ 1
ZFYVE1Q9HBF4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
ZFYVE1Q9HBF4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZFYVE1Q9HBF4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
ZFYVE1Q9HBF4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
ZFYVE1Q9HBF4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
ZFYVE1Q9HBF4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
ZFYVE1Q9HBF4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZFYVE1Q9HBF4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZFYVE1Q9HBF4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZFYVE1Q9HBF4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZFYVE1Q9HBF4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
ZFYVE1Q9HBF4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.28■■□□□ 1
ZFYVE1Q9HBF4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.28■■□□□ 1
ZFYVE1Q9HBF4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.28■■□□□ 1
ZFYVE1Q9HBF4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.28■■□□□ 1
ZFYVE1Q9HBF4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.28■■□□□ 1
ZFYVE1Q9HBF4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZFYVE1Q9HBF4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
ZFYVE1Q9HBF4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.28■■□□□ 1
ZFYVE1Q9HBF4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZFYVE1Q9HBF4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.27■■□□□ 1
ZFYVE1Q9HBF4 KRT87P-202ENST00000534226 1464 ntBASIC21.27■■□□□ 1
ZFYVE1Q9HBF4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.27■■□□□ 1
ZFYVE1Q9HBF4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
ZFYVE1Q9HBF4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZFYVE1Q9HBF4 AC104564.3-201ENST00000582367 638 ntBASIC21.27■■□□□ 1
ZFYVE1Q9HBF4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZFYVE1Q9HBF4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
ZFYVE1Q9HBF4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ZFYVE1Q9HBF4 FBXW4P1-201ENST00000426721 2239 ntBASIC21.27■□□□□ 0.99
ZFYVE1Q9HBF4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ZFYVE1Q9HBF4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.27■□□□□ 0.99
ZFYVE1Q9HBF4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE1Q9HBF4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE1Q9HBF4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE1Q9HBF4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ZFYVE1Q9HBF4 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.26■□□□□ 0.99
ZFYVE1Q9HBF4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE1Q9HBF4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE1Q9HBF4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE1Q9HBF4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.26■□□□□ 0.99
ZFYVE1Q9HBF4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE1Q9HBF4 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms