Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
LRRC40Q9H9A6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.6■■□□□ 1.05
LRRC40Q9H9A6 AL136967.2-201ENST00000623968 743 ntBASIC21.6■■□□□ 1.05
LRRC40Q9H9A6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRRC40Q9H9A6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRC40Q9H9A6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRC40Q9H9A6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRC40Q9H9A6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRRC40Q9H9A6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
LRRC40Q9H9A6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LRRC40Q9H9A6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
LRRC40Q9H9A6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRRC40Q9H9A6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.59■■□□□ 1.05
LRRC40Q9H9A6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LRRC40Q9H9A6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.59■■□□□ 1.05
LRRC40Q9H9A6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LRRC40Q9H9A6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
LRRC40Q9H9A6 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.59■■□□□ 1.05
LRRC40Q9H9A6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.59■■□□□ 1.05
LRRC40Q9H9A6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRRC40Q9H9A6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRRC40Q9H9A6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.58■■□□□ 1.05
LRRC40Q9H9A6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRC40Q9H9A6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRC40Q9H9A6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRC40Q9H9A6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRC40Q9H9A6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
LRRC40Q9H9A6 MIR572-201ENST00000384983 95 ntBASIC21.58■■□□□ 1.05
LRRC40Q9H9A6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.58■■□□□ 1.05
LRRC40Q9H9A6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.58■■□□□ 1.05
LRRC40Q9H9A6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRRC40Q9H9A6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRRC40Q9H9A6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRRC40Q9H9A6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRRC40Q9H9A6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRRC40Q9H9A6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRRC40Q9H9A6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.58■■□□□ 1.04
LRRC40Q9H9A6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC40Q9H9A6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.57■■□□□ 1.04
LRRC40Q9H9A6 AC009237.3-201ENST00000393279 1427 ntBASIC21.57■■□□□ 1.04
LRRC40Q9H9A6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC40Q9H9A6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC40Q9H9A6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC40Q9H9A6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
LRRC40Q9H9A6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.57■■□□□ 1.04
LRRC40Q9H9A6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.57■■□□□ 1.04
LRRC40Q9H9A6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.57■■□□□ 1.04
LRRC40Q9H9A6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.57■■□□□ 1.04
LRRC40Q9H9A6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.57■■□□□ 1.04
LRRC40Q9H9A6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
LRRC40Q9H9A6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC40Q9H9A6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC40Q9H9A6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC40Q9H9A6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC40Q9H9A6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC40Q9H9A6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC40Q9H9A6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.56■■□□□ 1.04
LRRC40Q9H9A6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC40Q9H9A6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.56■■□□□ 1.04
LRRC40Q9H9A6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.56■■□□□ 1.04
LRRC40Q9H9A6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
LRRC40Q9H9A6 SUDS3P1-201ENST00000505831 966 ntBASIC21.56■■□□□ 1.04
LRRC40Q9H9A6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
LRRC40Q9H9A6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC40Q9H9A6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.56■■□□□ 1.04
LRRC40Q9H9A6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC40Q9H9A6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.55■■□□□ 1.04
LRRC40Q9H9A6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
LRRC40Q9H9A6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.55■■□□□ 1.04
LRRC40Q9H9A6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.55■■□□□ 1.04
LRRC40Q9H9A6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC40Q9H9A6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.55■■□□□ 1.04
LRRC40Q9H9A6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LRRC40Q9H9A6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC40Q9H9A6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC40Q9H9A6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
LRRC40Q9H9A6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.55■■□□□ 1.04
LRRC40Q9H9A6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.55■■□□□ 1.04
LRRC40Q9H9A6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC40Q9H9A6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC40Q9H9A6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC40Q9H9A6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC40Q9H9A6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC40Q9H9A6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.54■■□□□ 1.04
LRRC40Q9H9A6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC40Q9H9A6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC40Q9H9A6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
LRRC40Q9H9A6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.54■■□□□ 1.04
LRRC40Q9H9A6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.54■■□□□ 1.04
LRRC40Q9H9A6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.54■■□□□ 1.04
LRRC40Q9H9A6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.54■■□□□ 1.04
LRRC40Q9H9A6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC40Q9H9A6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC40Q9H9A6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC40Q9H9A6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC40Q9H9A6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC40Q9H9A6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
LRRC40Q9H9A6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
LRRC40Q9H9A6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC40Q9H9A6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms