Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.13■■□□□ 1.13
DDX47Q9H0S4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.13■■□□□ 1.13
DDX47Q9H0S4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.13■■□□□ 1.13
DDX47Q9H0S4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
DDX47Q9H0S4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX47Q9H0S4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
DDX47Q9H0S4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX47Q9H0S4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX47Q9H0S4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX47Q9H0S4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.12■■□□□ 1.13
DDX47Q9H0S4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX47Q9H0S4 OXCT2P1-201ENST00000447263 1535 ntBASIC22.12■■□□□ 1.13
DDX47Q9H0S4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.12■■□□□ 1.13
DDX47Q9H0S4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX47Q9H0S4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
DDX47Q9H0S4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.12■■□□□ 1.13
DDX47Q9H0S4 AC068587.7-201ENST00000641602 218 ntBASIC22.12■■□□□ 1.13
DDX47Q9H0S4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
DDX47Q9H0S4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX47Q9H0S4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
DDX47Q9H0S4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX47Q9H0S4 AL049796.1-201ENST00000565336 1766 ntBASIC22.12■■□□□ 1.13
DDX47Q9H0S4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
DDX47Q9H0S4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
DDX47Q9H0S4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.12■■□□□ 1.13
DDX47Q9H0S4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX47Q9H0S4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX47Q9H0S4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX47Q9H0S4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX47Q9H0S4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX47Q9H0S4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.1■■□□□ 1.13
DDX47Q9H0S4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX47Q9H0S4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX47Q9H0S4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
DDX47Q9H0S4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.1■■□□□ 1.13
DDX47Q9H0S4 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.1■■□□□ 1.13
DDX47Q9H0S4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX47Q9H0S4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX47Q9H0S4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX47Q9H0S4 FEM1AP1-201ENST00000431297 1995 ntBASIC22.1■■□□□ 1.13
DDX47Q9H0S4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.1■■□□□ 1.13
DDX47Q9H0S4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.1■■□□□ 1.13
DDX47Q9H0S4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX47Q9H0S4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.1■■□□□ 1.13
DDX47Q9H0S4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DDX47Q9H0S4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DDX47Q9H0S4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX47Q9H0S4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX47Q9H0S4 OR2I1P-207ENST00000453522 948 ntBASIC22.09■■□□□ 1.13
DDX47Q9H0S4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.09■■□□□ 1.13
DDX47Q9H0S4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.09■■□□□ 1.13
DDX47Q9H0S4 MIR3181-201ENST00000578512 73 ntBASIC22.09■■□□□ 1.13
DDX47Q9H0S4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX47Q9H0S4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DDX47Q9H0S4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX47Q9H0S4 AC003102.1-202ENST00000563394 1796 ntBASIC22.09■■□□□ 1.13
DDX47Q9H0S4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.09■■□□□ 1.13
DDX47Q9H0S4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX47Q9H0S4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX47Q9H0S4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
DDX47Q9H0S4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX47Q9H0S4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
DDX47Q9H0S4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX47Q9H0S4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
DDX47Q9H0S4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
DDX47Q9H0S4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX47Q9H0S4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
DDX47Q9H0S4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
DDX47Q9H0S4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.08■■□□□ 1.13
DDX47Q9H0S4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.08■■□□□ 1.13
DDX47Q9H0S4 AC010141.3-201ENST00000456659 717 ntBASIC22.08■■□□□ 1.13
DDX47Q9H0S4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
DDX47Q9H0S4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
DDX47Q9H0S4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX47Q9H0S4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
DDX47Q9H0S4 AC010525.1-201ENST00000585559 441 ntBASIC22.07■■□□□ 1.12
DDX47Q9H0S4 AC087239.1-201ENST00000622671 572 ntBASIC22.07■■□□□ 1.12
DDX47Q9H0S4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX47Q9H0S4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX47Q9H0S4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
DDX47Q9H0S4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms