Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF38Q9H0F5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF38Q9H0F5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.13■■□□□ 1.13
RNF38Q9H0F5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.13■■□□□ 1.13
RNF38Q9H0F5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
RNF38Q9H0F5 AC006970.2-201ENST00000450065 779 ntBASIC22.13■■□□□ 1.13
RNF38Q9H0F5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.13■■□□□ 1.13
RNF38Q9H0F5 SLC7A5P2-201ENST00000553010 536 ntBASIC22.13■■□□□ 1.13
RNF38Q9H0F5 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.13■■□□□ 1.13
RNF38Q9H0F5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF38Q9H0F5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.13■■□□□ 1.13
RNF38Q9H0F5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
RNF38Q9H0F5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.12■■□□□ 1.13
RNF38Q9H0F5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RNF38Q9H0F5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RNF38Q9H0F5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.12■■□□□ 1.13
RNF38Q9H0F5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.11■■□□□ 1.13
RNF38Q9H0F5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF38Q9H0F5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF38Q9H0F5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF38Q9H0F5 MIR663A-201ENST00000385250 93 ntBASIC22.11■■□□□ 1.13
RNF38Q9H0F5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF38Q9H0F5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RNF38Q9H0F5 NCF1B-203ENST00000435988 1254 ntBASIC22.11■■□□□ 1.13
RNF38Q9H0F5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.11■■□□□ 1.13
RNF38Q9H0F5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.11■■□□□ 1.13
RNF38Q9H0F5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.11■■□□□ 1.13
RNF38Q9H0F5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
RNF38Q9H0F5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF38Q9H0F5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RNF38Q9H0F5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF38Q9H0F5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.11■■□□□ 1.13
RNF38Q9H0F5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF38Q9H0F5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF38Q9H0F5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RNF38Q9H0F5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF38Q9H0F5 AC003102.1-202ENST00000563394 1796 ntBASIC22.1■■□□□ 1.13
RNF38Q9H0F5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.1■■□□□ 1.13
RNF38Q9H0F5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
RNF38Q9H0F5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF38Q9H0F5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF38Q9H0F5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.1■■□□□ 1.13
RNF38Q9H0F5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF38Q9H0F5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF38Q9H0F5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF38Q9H0F5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.1■■□□□ 1.13
RNF38Q9H0F5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.1■■□□□ 1.13
RNF38Q9H0F5 AL050303.2-201ENST00000619798 666 ntBASIC22.1■■□□□ 1.13
RNF38Q9H0F5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF38Q9H0F5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.1■■□□□ 1.13
RNF38Q9H0F5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.1■■□□□ 1.13
RNF38Q9H0F5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.1■■□□□ 1.13
RNF38Q9H0F5 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF38Q9H0F5 AC026471.6-201ENST00000622954 1905 ntBASIC22.1■■□□□ 1.13
RNF38Q9H0F5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.09■■□□□ 1.13
RNF38Q9H0F5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF38Q9H0F5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF38Q9H0F5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RNF38Q9H0F5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.09■■□□□ 1.13
RNF38Q9H0F5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF38Q9H0F5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF38Q9H0F5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
RNF38Q9H0F5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF38Q9H0F5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.09■■□□□ 1.13
RNF38Q9H0F5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.09■■□□□ 1.13
RNF38Q9H0F5 AC104771.1-201ENST00000603335 964 ntBASIC22.09■■□□□ 1.13
RNF38Q9H0F5 AC231657.2-201ENST00000624556 255 ntBASIC22.09■■□□□ 1.13
RNF38Q9H0F5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF38Q9H0F5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF38Q9H0F5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF38Q9H0F5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF38Q9H0F5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
RNF38Q9H0F5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF38Q9H0F5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
RNF38Q9H0F5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
RNF38Q9H0F5 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RNF38Q9H0F5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
RNF38Q9H0F5 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF38Q9H0F5 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.13
RNF38Q9H0F5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF38Q9H0F5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RNF38Q9H0F5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.08■■□□□ 1.13
RNF38Q9H0F5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.08■■□□□ 1.13
RNF38Q9H0F5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.08■■□□□ 1.13
RNF38Q9H0F5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RNF38Q9H0F5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF38Q9H0F5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
RNF38Q9H0F5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
RNF38Q9H0F5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RNF38Q9H0F5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RNF38Q9H0F5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.12
RNF38Q9H0F5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
RNF38Q9H0F5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.07■■□□□ 1.12
RNF38Q9H0F5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF38Q9H0F5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF38Q9H0F5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF38Q9H0F5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.07■■□□□ 1.12
RNF38Q9H0F5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF38Q9H0F5 AC007322.1-201ENST00000426983 750 ntBASIC22.07■■□□□ 1.12
RNF38Q9H0F5 CNN2P6-201ENST00000439038 900 ntBASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms