Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
UPF3BQ9BZI7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
UPF3BQ9BZI7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.34■■□□□ 1.65
UPF3BQ9BZI7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
UPF3BQ9BZI7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
UPF3BQ9BZI7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC25.33■■□□□ 1.65
UPF3BQ9BZI7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
UPF3BQ9BZI7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.33■■□□□ 1.65
UPF3BQ9BZI7 AC126544.1-201ENST00000580842 1059 ntBASIC25.33■■□□□ 1.65
UPF3BQ9BZI7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
UPF3BQ9BZI7 AC110285.6-201ENST00000617652 491 ntBASIC25.33■■□□□ 1.65
UPF3BQ9BZI7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.33■■□□□ 1.65
UPF3BQ9BZI7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
UPF3BQ9BZI7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
UPF3BQ9BZI7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.33■■□□□ 1.64
UPF3BQ9BZI7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC25.33■■□□□ 1.64
UPF3BQ9BZI7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.64
UPF3BQ9BZI7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
UPF3BQ9BZI7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC25.32■■□□□ 1.64
UPF3BQ9BZI7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
UPF3BQ9BZI7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC25.32■■□□□ 1.64
UPF3BQ9BZI7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
UPF3BQ9BZI7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.32■■□□□ 1.64
UPF3BQ9BZI7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
UPF3BQ9BZI7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
UPF3BQ9BZI7 PBX2P1-201ENST00000493219 1291 ntBASIC25.32■■□□□ 1.64
UPF3BQ9BZI7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.32■■□□□ 1.64
UPF3BQ9BZI7 AL034346.1-201ENST00000568244 1277 ntBASIC25.32■■□□□ 1.64
UPF3BQ9BZI7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.32■■□□□ 1.64
UPF3BQ9BZI7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.32■■□□□ 1.64
UPF3BQ9BZI7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
UPF3BQ9BZI7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC25.32■■□□□ 1.64
UPF3BQ9BZI7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.32■■□□□ 1.64
UPF3BQ9BZI7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
UPF3BQ9BZI7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC25.31■■□□□ 1.64
UPF3BQ9BZI7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
UPF3BQ9BZI7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
UPF3BQ9BZI7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
UPF3BQ9BZI7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
UPF3BQ9BZI7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.31■■□□□ 1.64
UPF3BQ9BZI7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
UPF3BQ9BZI7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.31■■□□□ 1.64
UPF3BQ9BZI7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.31■■□□□ 1.64
UPF3BQ9BZI7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
UPF3BQ9BZI7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
UPF3BQ9BZI7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
UPF3BQ9BZI7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
UPF3BQ9BZI7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC25.31■■□□□ 1.64
UPF3BQ9BZI7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC25.31■■□□□ 1.64
UPF3BQ9BZI7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
UPF3BQ9BZI7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC25.3■■□□□ 1.64
UPF3BQ9BZI7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
UPF3BQ9BZI7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
UPF3BQ9BZI7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
UPF3BQ9BZI7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
UPF3BQ9BZI7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.3■■□□□ 1.64
UPF3BQ9BZI7 AP006587.3-201ENST00000525742 1516 ntBASIC25.3■■□□□ 1.64
UPF3BQ9BZI7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
UPF3BQ9BZI7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC25.3■■□□□ 1.64
UPF3BQ9BZI7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.3■■□□□ 1.64
UPF3BQ9BZI7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC25.3■■□□□ 1.64
UPF3BQ9BZI7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
UPF3BQ9BZI7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
UPF3BQ9BZI7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.29■■□□□ 1.64
UPF3BQ9BZI7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
UPF3BQ9BZI7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
UPF3BQ9BZI7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
UPF3BQ9BZI7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.29■■□□□ 1.64
UPF3BQ9BZI7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.29■■□□□ 1.64
UPF3BQ9BZI7 AC099791.1-201ENST00000416440 715 ntBASIC25.29■■□□□ 1.64
UPF3BQ9BZI7 IGHV3-19-201ENST00000521488 291 ntBASIC25.29■■□□□ 1.64
UPF3BQ9BZI7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.29■■□□□ 1.64
UPF3BQ9BZI7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.29■■□□□ 1.64
UPF3BQ9BZI7 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.29■■□□□ 1.64
UPF3BQ9BZI7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
UPF3BQ9BZI7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC25.29■■□□□ 1.64
UPF3BQ9BZI7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
UPF3BQ9BZI7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
UPF3BQ9BZI7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
UPF3BQ9BZI7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
UPF3BQ9BZI7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.28■■□□□ 1.64
UPF3BQ9BZI7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
UPF3BQ9BZI7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
UPF3BQ9BZI7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.28■■□□□ 1.64
UPF3BQ9BZI7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
UPF3BQ9BZI7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
UPF3BQ9BZI7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
UPF3BQ9BZI7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.28■■□□□ 1.64
UPF3BQ9BZI7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
UPF3BQ9BZI7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.28■■□□□ 1.64
UPF3BQ9BZI7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
UPF3BQ9BZI7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
UPF3BQ9BZI7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
UPF3BQ9BZI7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
UPF3BQ9BZI7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.27■■□□□ 1.64
UPF3BQ9BZI7 AP001330.3-201ENST00000520123 633 ntBASIC25.27■■□□□ 1.64
UPF3BQ9BZI7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.27■■□□□ 1.64
UPF3BQ9BZI7 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.27■■□□□ 1.64
UPF3BQ9BZI7 AC106739.1-201ENST00000617035 715 ntBASIC25.27■■□□□ 1.64
UPF3BQ9BZI7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms