Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 AC107956.1-201ENST00000494359 873 ntBASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP3Q9BZ76 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CNTNAP3Q9BZ76 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.35■□□□□ 0.85
CNTNAP3Q9BZ76 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP3Q9BZ76 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP3Q9BZ76 KRT17P3-201ENST00000420566 1262 ntBASIC20.35■□□□□ 0.85
CNTNAP3Q9BZ76 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.35■□□□□ 0.85
CNTNAP3Q9BZ76 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.35■□□□□ 0.85
CNTNAP3Q9BZ76 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CNTNAP3Q9BZ76 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CNTNAP3Q9BZ76 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.35■□□□□ 0.85
CNTNAP3Q9BZ76 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP3Q9BZ76 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
CNTNAP3Q9BZ76 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP3Q9BZ76 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP3Q9BZ76 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP3Q9BZ76 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.34■□□□□ 0.85
CNTNAP3Q9BZ76 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP3Q9BZ76 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.34■□□□□ 0.85
CNTNAP3Q9BZ76 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP3Q9BZ76 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.34■□□□□ 0.85
CNTNAP3Q9BZ76 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.34■□□□□ 0.85
CNTNAP3Q9BZ76 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.34■□□□□ 0.85
CNTNAP3Q9BZ76 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CNTNAP3Q9BZ76 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP3Q9BZ76 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP3Q9BZ76 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.33■□□□□ 0.85
CNTNAP3Q9BZ76 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
CNTNAP3Q9BZ76 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP3Q9BZ76 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.33■□□□□ 0.85
CNTNAP3Q9BZ76 AC010141.2-201ENST00000452426 721 ntBASIC20.33■□□□□ 0.85
CNTNAP3Q9BZ76 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP3Q9BZ76 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.33■□□□□ 0.85
CNTNAP3Q9BZ76 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CNTNAP3Q9BZ76 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.33■□□□□ 0.85
CNTNAP3Q9BZ76 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.33■□□□□ 0.85
CNTNAP3Q9BZ76 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP3Q9BZ76 AC068587.7-201ENST00000641602 218 ntBASIC20.33■□□□□ 0.85
CNTNAP3Q9BZ76 AC092865.7-201ENST00000641832 219 ntBASIC20.33■□□□□ 0.85
CNTNAP3Q9BZ76 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.33■□□□□ 0.84
CNTNAP3Q9BZ76 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CNTNAP3Q9BZ76 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNTNAP3Q9BZ76 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP3Q9BZ76 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTNAP3Q9BZ76 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP3Q9BZ76 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
CNTNAP3Q9BZ76 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP3Q9BZ76 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTNAP3Q9BZ76 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP3Q9BZ76 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.32■□□□□ 0.84
CNTNAP3Q9BZ76 AC010141.3-201ENST00000456659 717 ntBASIC20.32■□□□□ 0.84
CNTNAP3Q9BZ76 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.32■□□□□ 0.84
CNTNAP3Q9BZ76 MIR4785-201ENST00000585005 73 ntBASIC20.32■□□□□ 0.84
CNTNAP3Q9BZ76 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP3Q9BZ76 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CNTNAP3Q9BZ76 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP3Q9BZ76 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTNAP3Q9BZ76 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP3Q9BZ76 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTNAP3Q9BZ76 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP3Q9BZ76 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTNAP3Q9BZ76 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP3Q9BZ76 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP3Q9BZ76 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP3Q9BZ76 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP3Q9BZ76 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP3Q9BZ76 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.31■□□□□ 0.84
CNTNAP3Q9BZ76 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTNAP3Q9BZ76 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTNAP3Q9BZ76 AC233263.1-201ENST00000578059 224 ntBASIC20.31■□□□□ 0.84
CNTNAP3Q9BZ76 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CNTNAP3Q9BZ76 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTNAP3Q9BZ76 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.31■□□□□ 0.84
CNTNAP3Q9BZ76 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP3Q9BZ76 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CNTNAP3Q9BZ76 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP3Q9BZ76 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP3Q9BZ76 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CNTNAP3Q9BZ76 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.3■□□□□ 0.84
CNTNAP3Q9BZ76 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.3■□□□□ 0.84
CNTNAP3Q9BZ76 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP3Q9BZ76 AC010980.2-201ENST00000587099 1412 ntBASIC20.3■□□□□ 0.84
CNTNAP3Q9BZ76 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP3Q9BZ76 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP3Q9BZ76 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms