Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCL13Q99616 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCL13Q99616 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCL13Q99616 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCL13Q99616 AC026271.2-201ENST00000428091 497 ntBASIC17.82■□□□□ 0.44
CCL13Q99616 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.82■□□□□ 0.44
CCL13Q99616 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.82■□□□□ 0.44
CCL13Q99616 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCL13Q99616 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CCL13Q99616 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
CCL13Q99616 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCL13Q99616 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCL13Q99616 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCL13Q99616 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
CCL13Q99616 AC010542.4-201ENST00000563151 1910 ntBASIC17.81■□□□□ 0.44
CCL13Q99616 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.81■□□□□ 0.44
CCL13Q99616 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.81■□□□□ 0.44
CCL13Q99616 KRT18P14-201ENST00000534205 1250 ntBASIC17.81■□□□□ 0.44
CCL13Q99616 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.81■□□□□ 0.44
CCL13Q99616 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.81■□□□□ 0.44
CCL13Q99616 TERF1P2-201ENST00000583350 1212 ntBASIC17.81■□□□□ 0.44
CCL13Q99616 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.81■□□□□ 0.44
CCL13Q99616 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CCL13Q99616 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.81■□□□□ 0.44
CCL13Q99616 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCL13Q99616 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CCL13Q99616 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.81■□□□□ 0.44
CCL13Q99616 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCL13Q99616 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCL13Q99616 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCL13Q99616 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.81■□□□□ 0.44
CCL13Q99616 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.81■□□□□ 0.44
CCL13Q99616 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCL13Q99616 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCL13Q99616 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCL13Q99616 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCL13Q99616 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCL13Q99616 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.8■□□□□ 0.44
CCL13Q99616 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
CCL13Q99616 AC079140.4-201ENST00000507448 529 ntBASIC17.8■□□□□ 0.44
CCL13Q99616 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCL13Q99616 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.8■□□□□ 0.44
CCL13Q99616 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCL13Q99616 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCL13Q99616 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCL13Q99616 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCL13Q99616 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCL13Q99616 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL13Q99616 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.79■□□□□ 0.44
CCL13Q99616 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL13Q99616 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.79■□□□□ 0.44
CCL13Q99616 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL13Q99616 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CCL13Q99616 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.79■□□□□ 0.44
CCL13Q99616 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.79■□□□□ 0.44
CCL13Q99616 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL13Q99616 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.79■□□□□ 0.44
CCL13Q99616 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.79■□□□□ 0.44
CCL13Q99616 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.79■□□□□ 0.44
CCL13Q99616 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCL13Q99616 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.79■□□□□ 0.44
CCL13Q99616 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.79■□□□□ 0.44
CCL13Q99616 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.79■□□□□ 0.44
CCL13Q99616 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL13Q99616 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCL13Q99616 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCL13Q99616 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL13Q99616 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL13Q99616 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCL13Q99616 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCL13Q99616 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL13Q99616 AC003102.1-202ENST00000563394 1796 ntBASIC17.79■□□□□ 0.44
CCL13Q99616 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL13Q99616 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCL13Q99616 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL13Q99616 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCL13Q99616 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.78■□□□□ 0.44
CCL13Q99616 FBXW4P1-201ENST00000426721 2239 ntBASIC17.78■□□□□ 0.44
CCL13Q99616 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL13Q99616 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL13Q99616 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.78■□□□□ 0.44
CCL13Q99616 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.78■□□□□ 0.44
CCL13Q99616 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.78■□□□□ 0.44
CCL13Q99616 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL13Q99616 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCL13Q99616 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.78■□□□□ 0.44
CCL13Q99616 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL13Q99616 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCL13Q99616 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL13Q99616 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL13Q99616 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL13Q99616 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL13Q99616 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL13Q99616 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL13Q99616 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CCL13Q99616 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL13Q99616 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.77■□□□□ 0.44
CCL13Q99616 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL13Q99616 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.77■□□□□ 0.44
CCL13Q99616 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms