Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.35■□□□□ 0.69
SPENQ96T58 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPENQ96T58 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPENQ96T58 AC026366.1-201ENST00000488803 879 ntBASIC19.35■□□□□ 0.69
SPENQ96T58 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.35■□□□□ 0.69
SPENQ96T58 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.35■□□□□ 0.69
SPENQ96T58 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SPENQ96T58 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPENQ96T58 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.35■□□□□ 0.69
SPENQ96T58 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.35■□□□□ 0.69
SPENQ96T58 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPENQ96T58 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPENQ96T58 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPENQ96T58 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
SPENQ96T58 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SPENQ96T58 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPENQ96T58 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPENQ96T58 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SPENQ96T58 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPENQ96T58 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPENQ96T58 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.34■□□□□ 0.69
SPENQ96T58 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPENQ96T58 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.34■□□□□ 0.69
SPENQ96T58 AC138907.5-202ENST00000569484 235 ntBASIC19.34■□□□□ 0.69
SPENQ96T58 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPENQ96T58 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPENQ96T58 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.33■□□□□ 0.69
SPENQ96T58 MIR4758-201ENST00000577688 71 ntBASIC19.33■□□□□ 0.69
SPENQ96T58 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.33■□□□□ 0.69
SPENQ96T58 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SPENQ96T58 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPENQ96T58 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
SPENQ96T58 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SPENQ96T58 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SPENQ96T58 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SPENQ96T58 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SPENQ96T58 ECEL1P3-201ENST00000427961 737 ntBASIC19.33■□□□□ 0.68
SPENQ96T58 AC137767.1-201ENST00000602918 1920 ntBASIC19.33■□□□□ 0.68
SPENQ96T58 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SPENQ96T58 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPENQ96T58 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SPENQ96T58 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SPENQ96T58 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SPENQ96T58 AC010141.2-201ENST00000452426 721 ntBASIC19.32■□□□□ 0.68
SPENQ96T58 UNC93B5-201ENST00000530315 699 ntBASIC19.32■□□□□ 0.68
SPENQ96T58 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPENQ96T58 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPENQ96T58 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPENQ96T58 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPENQ96T58 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SPENQ96T58 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.32■□□□□ 0.68
SPENQ96T58 MIR4497-201ENST00000583208 89 ntBASIC19.32■□□□□ 0.68
SPENQ96T58 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPENQ96T58 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.32■□□□□ 0.68
SPENQ96T58 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.32■□□□□ 0.68
SPENQ96T58 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
SPENQ96T58 AP004607.7-201ENST00000527152 1677 ntBASIC19.32■□□□□ 0.68
SPENQ96T58 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPENQ96T58 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.32■□□□□ 0.68
SPENQ96T58 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.32■□□□□ 0.68
SPENQ96T58 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPENQ96T58 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.32■□□□□ 0.68
SPENQ96T58 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPENQ96T58 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPENQ96T58 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.31■□□□□ 0.68
SPENQ96T58 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.31■□□□□ 0.68
SPENQ96T58 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.31■□□□□ 0.68
SPENQ96T58 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.31■□□□□ 0.68
SPENQ96T58 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SPENQ96T58 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPENQ96T58 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPENQ96T58 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPENQ96T58 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.31■□□□□ 0.68
SPENQ96T58 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPENQ96T58 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.31■□□□□ 0.68
SPENQ96T58 AP006294.2-201ENST00000641667 209 ntBASIC19.31■□□□□ 0.68
SPENQ96T58 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.3■□□□□ 0.68
SPENQ96T58 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SPENQ96T58 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.3■□□□□ 0.68
SPENQ96T58 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SPENQ96T58 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.3■□□□□ 0.68
SPENQ96T58 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPENQ96T58 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPENQ96T58 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.3■□□□□ 0.68
SPENQ96T58 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
SPENQ96T58 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.3■□□□□ 0.68
SPENQ96T58 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.3■□□□□ 0.68
SPENQ96T58 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPENQ96T58 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.3■□□□□ 0.68
SPENQ96T58 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.3■□□□□ 0.68
SPENQ96T58 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.3■□□□□ 0.68
SPENQ96T58 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPENQ96T58 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.3■□□□□ 0.68
SPENQ96T58 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.3■□□□□ 0.68
SPENQ96T58 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPENQ96T58 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.29■□□□□ 0.68
SPENQ96T58 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPENQ96T58 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPENQ96T58 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPENQ96T58 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms