Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CDK5RAP1Q96SZ6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDK5RAP1Q96SZ6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
CDK5RAP1Q96SZ6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDK5RAP1Q96SZ6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDK5RAP1Q96SZ6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDK5RAP1Q96SZ6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.12■■□□□ 1.13
CDK5RAP1Q96SZ6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDK5RAP1Q96SZ6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.12■■□□□ 1.13
CDK5RAP1Q96SZ6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDK5RAP1Q96SZ6 AC008175.2-201ENST00000612840 297 ntBASIC22.12■■□□□ 1.13
CDK5RAP1Q96SZ6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.12■■□□□ 1.13
CDK5RAP1Q96SZ6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDK5RAP1Q96SZ6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
CDK5RAP1Q96SZ6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.12■■□□□ 1.13
CDK5RAP1Q96SZ6 AC233723.2-201ENST00000623798 2106 ntBASIC22.12■■□□□ 1.13
CDK5RAP1Q96SZ6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.12■■□□□ 1.13
CDK5RAP1Q96SZ6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
CDK5RAP1Q96SZ6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.11■■□□□ 1.13
CDK5RAP1Q96SZ6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDK5RAP1Q96SZ6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDK5RAP1Q96SZ6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.11■■□□□ 1.13
CDK5RAP1Q96SZ6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.11■■□□□ 1.13
CDK5RAP1Q96SZ6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDK5RAP1Q96SZ6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.11■■□□□ 1.13
CDK5RAP1Q96SZ6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
CDK5RAP1Q96SZ6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDK5RAP1Q96SZ6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDK5RAP1Q96SZ6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.11■■□□□ 1.13
CDK5RAP1Q96SZ6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDK5RAP1Q96SZ6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDK5RAP1Q96SZ6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDK5RAP1Q96SZ6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDK5RAP1Q96SZ6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDK5RAP1Q96SZ6 GUSBP5-202ENST00000510805 1989 ntBASIC22.1■■□□□ 1.13
CDK5RAP1Q96SZ6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.1■■□□□ 1.13
CDK5RAP1Q96SZ6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDK5RAP1Q96SZ6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDK5RAP1Q96SZ6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDK5RAP1Q96SZ6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.1■■□□□ 1.13
CDK5RAP1Q96SZ6 POU5F1P4-201ENST00000413175 1085 ntBASIC22.1■■□□□ 1.13
CDK5RAP1Q96SZ6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.1■■□□□ 1.13
CDK5RAP1Q96SZ6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.1■■□□□ 1.13
CDK5RAP1Q96SZ6 AC080038.1-201ENST00000611274 1154 ntBASIC22.1■■□□□ 1.13
CDK5RAP1Q96SZ6 AC120498.10-201ENST00000621827 505 ntBASIC22.1■■□□□ 1.13
CDK5RAP1Q96SZ6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDK5RAP1Q96SZ6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.1■■□□□ 1.13
CDK5RAP1Q96SZ6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDK5RAP1Q96SZ6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDK5RAP1Q96SZ6 AC003102.1-202ENST00000563394 1796 ntBASIC22.1■■□□□ 1.13
CDK5RAP1Q96SZ6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
CDK5RAP1Q96SZ6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.09■■□□□ 1.13
CDK5RAP1Q96SZ6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDK5RAP1Q96SZ6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDK5RAP1Q96SZ6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDK5RAP1Q96SZ6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDK5RAP1Q96SZ6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.09■■□□□ 1.13
CDK5RAP1Q96SZ6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDK5RAP1Q96SZ6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.09■■□□□ 1.13
CDK5RAP1Q96SZ6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CDK5RAP1Q96SZ6 UBE2DNL-204ENST00000602536 740 ntBASIC22.09■■□□□ 1.13
CDK5RAP1Q96SZ6 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.09■■□□□ 1.13
CDK5RAP1Q96SZ6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDK5RAP1Q96SZ6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDK5RAP1Q96SZ6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.09■■□□□ 1.13
CDK5RAP1Q96SZ6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDK5RAP1Q96SZ6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDK5RAP1Q96SZ6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDK5RAP1Q96SZ6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDK5RAP1Q96SZ6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.08■■□□□ 1.13
CDK5RAP1Q96SZ6 SLC7A5P1-201ENST00000568957 537 ntBASIC22.08■■□□□ 1.13
CDK5RAP1Q96SZ6 AC011767.1-201ENST00000617410 1153 ntBASIC22.08■■□□□ 1.13
CDK5RAP1Q96SZ6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDK5RAP1Q96SZ6 MYCNOS-205ENST00000641950 531 ntBASIC22.08■■□□□ 1.13
CDK5RAP1Q96SZ6 FAM99A-202ENST00000538190 1989 ntBASIC22.08■■□□□ 1.12
CDK5RAP1Q96SZ6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.08■■□□□ 1.12
CDK5RAP1Q96SZ6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CDK5RAP1Q96SZ6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CDK5RAP1Q96SZ6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.08■■□□□ 1.12
CDK5RAP1Q96SZ6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CDK5RAP1Q96SZ6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDK5RAP1Q96SZ6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDK5RAP1Q96SZ6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDK5RAP1Q96SZ6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.07■■□□□ 1.12
CDK5RAP1Q96SZ6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.07■■□□□ 1.12
CDK5RAP1Q96SZ6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.07■■□□□ 1.12
CDK5RAP1Q96SZ6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDK5RAP1Q96SZ6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDK5RAP1Q96SZ6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDK5RAP1Q96SZ6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.07■■□□□ 1.12
CDK5RAP1Q96SZ6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDK5RAP1Q96SZ6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.07■■□□□ 1.12
CDK5RAP1Q96SZ6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDK5RAP1Q96SZ6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.06■■□□□ 1.12
CDK5RAP1Q96SZ6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
CDK5RAP1Q96SZ6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDK5RAP1Q96SZ6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
CDK5RAP1Q96SZ6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDK5RAP1Q96SZ6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms