Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00479Q96M42 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00479Q96M42 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LINC00479Q96M42 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.21■□□□□ 0.18
LINC00479Q96M42 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LINC00479Q96M42 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00479Q96M42 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00479Q96M42 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00479Q96M42 KRT8P33-201ENST00000508125 1423 ntBASIC16.2■□□□□ 0.18
LINC00479Q96M42 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00479Q96M42 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00479Q96M42 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00479Q96M42 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00479Q96M42 TSPY13P-201ENST00000338964 914 ntBASIC16.2■□□□□ 0.18
LINC00479Q96M42 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00479Q96M42 AC079089.2-201ENST00000531211 1277 ntBASIC16.2■□□□□ 0.18
LINC00479Q96M42 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00479Q96M42 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00479Q96M42 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00479Q96M42 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00479Q96M42 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00479Q96M42 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LINC00479Q96M42 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00479Q96M42 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LINC00479Q96M42 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00479Q96M42 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00479Q96M42 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00479Q96M42 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC00479Q96M42 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00479Q96M42 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00479Q96M42 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC00479Q96M42 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00479Q96M42 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LINC00479Q96M42 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LINC00479Q96M42 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00479Q96M42 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC00479Q96M42 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC00479Q96M42 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LINC00479Q96M42 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LINC00479Q96M42 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC00479Q96M42 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00479Q96M42 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LINC00479Q96M42 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LINC00479Q96M42 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LINC00479Q96M42 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00479Q96M42 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00479Q96M42 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00479Q96M42 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
LINC00479Q96M42 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00479Q96M42 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC00479Q96M42 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC00479Q96M42 AL049796.1-201ENST00000565336 1766 ntBASIC16.18■□□□□ 0.18
LINC00479Q96M42 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC00479Q96M42 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00479Q96M42 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00479Q96M42 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC00479Q96M42 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.18■□□□□ 0.18
LINC00479Q96M42 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.18■□□□□ 0.18
LINC00479Q96M42 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00479Q96M42 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00479Q96M42 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00479Q96M42 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.18■□□□□ 0.18
LINC00479Q96M42 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00479Q96M42 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00479Q96M42 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00479Q96M42 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00479Q96M42 OXCT2P1-201ENST00000447263 1535 ntBASIC16.18■□□□□ 0.18
LINC00479Q96M42 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LINC00479Q96M42 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00479Q96M42 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC00479Q96M42 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00479Q96M42 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00479Q96M42 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00479Q96M42 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00479Q96M42 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.17■□□□□ 0.18
LINC00479Q96M42 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.17■□□□□ 0.18
LINC00479Q96M42 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00479Q96M42 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.17■□□□□ 0.18
LINC00479Q96M42 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
LINC00479Q96M42 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.17■□□□□ 0.18
LINC00479Q96M42 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00479Q96M42 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00479Q96M42 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.17■□□□□ 0.18
LINC00479Q96M42 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00479Q96M42 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00479Q96M42 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00479Q96M42 OR7E47P-201ENST00000546390 1422 ntBASIC16.17■□□□□ 0.18
LINC00479Q96M42 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00479Q96M42 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.17■□□□□ 0.18
LINC00479Q96M42 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00479Q96M42 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.17■□□□□ 0.18
LINC00479Q96M42 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.17■□□□□ 0.18
LINC00479Q96M42 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LINC00479Q96M42 AC021242.3-201ENST00000607598 1377 ntBASIC16.16■□□□□ 0.18
LINC00479Q96M42 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC00479Q96M42 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
LINC00479Q96M42 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC00479Q96M42 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.16■□□□□ 0.18
LINC00479Q96M42 AL499627.2-201ENST00000606283 725 ntBASIC16.16■□□□□ 0.18
LINC00479Q96M42 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms