Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.1■□□□□ 0.33
RITA1Q96K30 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RITA1Q96K30 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.1■□□□□ 0.33
RITA1Q96K30 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RITA1Q96K30 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RITA1Q96K30 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RITA1Q96K30 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RITA1Q96K30 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RITA1Q96K30 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.09■□□□□ 0.33
RITA1Q96K30 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.09■□□□□ 0.33
RITA1Q96K30 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RITA1Q96K30 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RITA1Q96K30 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.09■□□□□ 0.33
RITA1Q96K30 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.09■□□□□ 0.33
RITA1Q96K30 AC055733.4-201ENST00000638462 1354 ntBASIC17.09■□□□□ 0.33
RITA1Q96K30 AC009237.3-201ENST00000393279 1427 ntBASIC17.09■□□□□ 0.33
RITA1Q96K30 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RITA1Q96K30 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RITA1Q96K30 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RITA1Q96K30 AC005224.4-201ENST00000583262 1652 ntBASIC17.09■□□□□ 0.33
RITA1Q96K30 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RITA1Q96K30 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RITA1Q96K30 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.09■□□□□ 0.33
RITA1Q96K30 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
RITA1Q96K30 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RITA1Q96K30 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RITA1Q96K30 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.08■□□□□ 0.33
RITA1Q96K30 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RITA1Q96K30 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.08■□□□□ 0.33
RITA1Q96K30 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RITA1Q96K30 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RITA1Q96K30 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
RITA1Q96K30 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.08■□□□□ 0.32
RITA1Q96K30 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RITA1Q96K30 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RITA1Q96K30 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RITA1Q96K30 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.08■□□□□ 0.32
RITA1Q96K30 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RITA1Q96K30 AL354811.1-201ENST00000610286 706 ntBASIC17.08■□□□□ 0.32
RITA1Q96K30 AL358852.1-201ENST00000623174 1268 ntBASIC17.08■□□□□ 0.32
RITA1Q96K30 Z98882.1-201ENST00000622160 2253 ntBASIC17.08■□□□□ 0.32
RITA1Q96K30 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RITA1Q96K30 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
RITA1Q96K30 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RITA1Q96K30 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RITA1Q96K30 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RITA1Q96K30 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RITA1Q96K30 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.07■□□□□ 0.32
RITA1Q96K30 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RITA1Q96K30 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.07■□□□□ 0.32
RITA1Q96K30 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RITA1Q96K30 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
RITA1Q96K30 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.07■□□□□ 0.32
RITA1Q96K30 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.07■□□□□ 0.32
RITA1Q96K30 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.07■□□□□ 0.32
RITA1Q96K30 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.07■□□□□ 0.32
RITA1Q96K30 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.07■□□□□ 0.32
RITA1Q96K30 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
RITA1Q96K30 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RITA1Q96K30 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.07■□□□□ 0.32
RITA1Q96K30 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.07■□□□□ 0.32
RITA1Q96K30 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RITA1Q96K30 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RITA1Q96K30 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RITA1Q96K30 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RITA1Q96K30 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RITA1Q96K30 AC104564.3-201ENST00000582367 638 ntBASIC17.06■□□□□ 0.32
RITA1Q96K30 TPRG1LP1-201ENST00000598702 760 ntBASIC17.06■□□□□ 0.32
RITA1Q96K30 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.06■□□□□ 0.32
RITA1Q96K30 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.06■□□□□ 0.32
RITA1Q96K30 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RITA1Q96K30 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RITA1Q96K30 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RITA1Q96K30 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RITA1Q96K30 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.06■□□□□ 0.32
RITA1Q96K30 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.06■□□□□ 0.32
RITA1Q96K30 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RITA1Q96K30 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RITA1Q96K30 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RITA1Q96K30 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RITA1Q96K30 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RITA1Q96K30 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RITA1Q96K30 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.05■□□□□ 0.32
RITA1Q96K30 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RITA1Q96K30 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RITA1Q96K30 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RITA1Q96K30 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RITA1Q96K30 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RITA1Q96K30 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RITA1Q96K30 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.05■□□□□ 0.32
RITA1Q96K30 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RITA1Q96K30 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.05■□□□□ 0.32
RITA1Q96K30 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RITA1Q96K30 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RITA1Q96K30 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.04■□□□□ 0.32
RITA1Q96K30 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RITA1Q96K30 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RITA1Q96K30 AC005229.4-201ENST00000610085 2198 ntBASIC17.04■□□□□ 0.32
RITA1Q96K30 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RITA1Q96K30 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms