Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AC242852.2-201ENST00000615738 1807 ntBASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH3KBP1Q96B97 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21■□□□□ 0.95
SH3KBP1Q96B97 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
SH3KBP1Q96B97 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21■□□□□ 0.95
SH3KBP1Q96B97 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SH3KBP1Q96B97 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH3KBP1Q96B97 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21■□□□□ 0.95
SH3KBP1Q96B97 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21■□□□□ 0.95
SH3KBP1Q96B97 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21■□□□□ 0.95
SH3KBP1Q96B97 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
SH3KBP1Q96B97 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21■□□□□ 0.95
SH3KBP1Q96B97 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21■□□□□ 0.95
SH3KBP1Q96B97 IKBKGP1-201ENST00000612193 1073 ntBASIC21■□□□□ 0.95
SH3KBP1Q96B97 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21■□□□□ 0.95
SH3KBP1Q96B97 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH3KBP1Q96B97 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21■□□□□ 0.95
SH3KBP1Q96B97 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 CLDN5-201ENST00000403084 2357 ntBASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.99■□□□□ 0.95
SH3KBP1Q96B97 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3KBP1Q96B97 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SH3KBP1Q96B97 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3KBP1Q96B97 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3KBP1Q96B97 OR7E47P-201ENST00000546390 1422 ntBASIC20.98■□□□□ 0.95
SH3KBP1Q96B97 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SH3KBP1Q96B97 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SH3KBP1Q96B97 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.98■□□□□ 0.95
SH3KBP1Q96B97 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3KBP1Q96B97 AC079140.4-201ENST00000507448 529 ntBASIC20.98■□□□□ 0.95
SH3KBP1Q96B97 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.98■□□□□ 0.95
SH3KBP1Q96B97 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.98■□□□□ 0.95
SH3KBP1Q96B97 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.98■□□□□ 0.95
SH3KBP1Q96B97 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3KBP1Q96B97 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3KBP1Q96B97 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3KBP1Q96B97 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SH3KBP1Q96B97 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3KBP1Q96B97 AC139530.1-201ENST00000575312 1977 ntBASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 KRT19P1-201ENST00000405746 1186 ntBASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 AC080038.3-201ENST00000623346 1952 ntBASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SH3KBP1Q96B97 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 AC005224.4-201ENST00000583262 1652 ntBASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SH3KBP1Q96B97 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3KBP1Q96B97 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms