Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF4Q92544 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF4Q92544 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TM9SF4Q92544 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF4Q92544 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.04■□□□□ 0.8
TM9SF4Q92544 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF4Q92544 ESRRAP2-201ENST00000418437 1549 ntBASIC20.04■□□□□ 0.8
TM9SF4Q92544 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TM9SF4Q92544 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.04■□□□□ 0.8
TM9SF4Q92544 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.04■□□□□ 0.8
TM9SF4Q92544 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.04■□□□□ 0.8
TM9SF4Q92544 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.04■□□□□ 0.8
TM9SF4Q92544 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF4Q92544 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.04■□□□□ 0.8
TM9SF4Q92544 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF4Q92544 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TM9SF4Q92544 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF4Q92544 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF4Q92544 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF4Q92544 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF4Q92544 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.04■□□□□ 0.8
TM9SF4Q92544 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF4Q92544 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TM9SF4Q92544 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.03■□□□□ 0.8
TM9SF4Q92544 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.03■□□□□ 0.8
TM9SF4Q92544 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF4Q92544 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF4Q92544 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF4Q92544 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
TM9SF4Q92544 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF4Q92544 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF4Q92544 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF4Q92544 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.03■□□□□ 0.8
TM9SF4Q92544 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.03■□□□□ 0.8
TM9SF4Q92544 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF4Q92544 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TM9SF4Q92544 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TM9SF4Q92544 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF4Q92544 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF4Q92544 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF4Q92544 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.02■□□□□ 0.8
TM9SF4Q92544 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF4Q92544 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF4Q92544 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF4Q92544 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TM9SF4Q92544 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF4Q92544 CDCA4P2-201ENST00000441182 718 ntBASIC20.02■□□□□ 0.8
TM9SF4Q92544 AC006970.2-201ENST00000450065 779 ntBASIC20.02■□□□□ 0.8
TM9SF4Q92544 KRT18P61-201ENST00000585825 1298 ntBASIC20.02■□□□□ 0.8
TM9SF4Q92544 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.02■□□□□ 0.8
TM9SF4Q92544 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
TM9SF4Q92544 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.02■□□□□ 0.8
TM9SF4Q92544 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.02■□□□□ 0.8
TM9SF4Q92544 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.02■□□□□ 0.8
TM9SF4Q92544 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.02■□□□□ 0.8
TM9SF4Q92544 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF4Q92544 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.02■□□□□ 0.8
TM9SF4Q92544 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.02■□□□□ 0.8
TM9SF4Q92544 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF4Q92544 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TM9SF4Q92544 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TM9SF4Q92544 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TM9SF4Q92544 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.02■□□□□ 0.79
TM9SF4Q92544 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF4Q92544 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF4Q92544 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.01■□□□□ 0.79
TM9SF4Q92544 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TM9SF4Q92544 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF4Q92544 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF4Q92544 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TM9SF4Q92544 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.01■□□□□ 0.79
TM9SF4Q92544 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.01■□□□□ 0.79
TM9SF4Q92544 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.01■□□□□ 0.79
TM9SF4Q92544 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.01■□□□□ 0.79
TM9SF4Q92544 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF4Q92544 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.01■□□□□ 0.79
TM9SF4Q92544 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.01■□□□□ 0.79
TM9SF4Q92544 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM9SF4Q92544 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM9SF4Q92544 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM9SF4Q92544 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20■□□□□ 0.79
TM9SF4Q92544 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
TM9SF4Q92544 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20■□□□□ 0.79
TM9SF4Q92544 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM9SF4Q92544 GXYLT1P5-201ENST00000614548 1189 ntBASIC20■□□□□ 0.79
TM9SF4Q92544 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20■□□□□ 0.79
TM9SF4Q92544 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TM9SF4Q92544 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM9SF4Q92544 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TM9SF4Q92544 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF4Q92544 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF4Q92544 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF4Q92544 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF4Q92544 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF4Q92544 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF4Q92544 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.99■□□□□ 0.79
TM9SF4Q92544 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF4Q92544 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.99■□□□□ 0.79
TM9SF4Q92544 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.99■□□□□ 0.79
TM9SF4Q92544 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms