Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC105233.4-201ENST00000642045 216 ntBASIC22.72■■□□□ 1.23
DDX1Q92499 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.72■■□□□ 1.23
DDX1Q92499 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
DDX1Q92499 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
DDX1Q92499 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX1Q92499 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX1Q92499 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
DDX1Q92499 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX1Q92499 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.71■■□□□ 1.23
DDX1Q92499 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.71■■□□□ 1.23
DDX1Q92499 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
DDX1Q92499 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX1Q92499 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.71■■□□□ 1.23
DDX1Q92499 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
DDX1Q92499 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
DDX1Q92499 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.71■■□□□ 1.23
DDX1Q92499 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.7■■□□□ 1.22
DDX1Q92499 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX1Q92499 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX1Q92499 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.7■■□□□ 1.22
DDX1Q92499 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.7■■□□□ 1.22
DDX1Q92499 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX1Q92499 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.7■■□□□ 1.22
DDX1Q92499 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
DDX1Q92499 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.7■■□□□ 1.22
DDX1Q92499 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX1Q92499 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX1Q92499 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
DDX1Q92499 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
DDX1Q92499 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX1Q92499 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.69■■□□□ 1.22
DDX1Q92499 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX1Q92499 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX1Q92499 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
DDX1Q92499 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX1Q92499 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.69■■□□□ 1.22
DDX1Q92499 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
DDX1Q92499 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.69■■□□□ 1.22
DDX1Q92499 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX1Q92499 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.69■■□□□ 1.22
DDX1Q92499 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.68■■□□□ 1.22
DDX1Q92499 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX1Q92499 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX1Q92499 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
DDX1Q92499 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX1Q92499 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.68■■□□□ 1.22
DDX1Q92499 KRT18P5-201ENST00000436075 1291 ntBASIC22.68■■□□□ 1.22
DDX1Q92499 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
DDX1Q92499 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX1Q92499 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX1Q92499 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.67■■□□□ 1.22
DDX1Q92499 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.67■■□□□ 1.22
DDX1Q92499 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX1Q92499 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.67■■□□□ 1.22
DDX1Q92499 AC055733.4-201ENST00000638462 1354 ntBASIC22.67■■□□□ 1.22
DDX1Q92499 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX1Q92499 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX1Q92499 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.67■■□□□ 1.22
DDX1Q92499 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.67■■□□□ 1.22
DDX1Q92499 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX1Q92499 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
DDX1Q92499 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.67■■□□□ 1.22
DDX1Q92499 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.67■■□□□ 1.22
DDX1Q92499 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.67■■□□□ 1.22
DDX1Q92499 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
DDX1Q92499 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX1Q92499 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
DDX1Q92499 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX1Q92499 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX1Q92499 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.66■■□□□ 1.22
DDX1Q92499 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.66■■□□□ 1.22
DDX1Q92499 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.66■■□□□ 1.22
DDX1Q92499 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX1Q92499 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX1Q92499 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.66■■□□□ 1.22
DDX1Q92499 AC009237.3-201ENST00000393279 1427 ntBASIC22.65■■□□□ 1.22
DDX1Q92499 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.65■■□□□ 1.22
DDX1Q92499 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX1Q92499 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.65■■□□□ 1.22
DDX1Q92499 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX1Q92499 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.65■■□□□ 1.22
DDX1Q92499 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX1Q92499 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.65■■□□□ 1.22
DDX1Q92499 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.65■■□□□ 1.22
DDX1Q92499 AC012414.1-201ENST00000556676 535 ntBASIC22.65■■□□□ 1.22
DDX1Q92499 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.65■■□□□ 1.22
DDX1Q92499 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.65■■□□□ 1.22
DDX1Q92499 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
DDX1Q92499 BX005040.4-201ENST00000637145 1518 ntBASIC22.65■■□□□ 1.22
DDX1Q92499 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.65■■□□□ 1.22
DDX1Q92499 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX1Q92499 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.65■■□□□ 1.22
DDX1Q92499 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.65■■□□□ 1.22
DDX1Q92499 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
DDX1Q92499 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
DDX1Q92499 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.64■■□□□ 1.22
DDX1Q92499 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
DDX1Q92499 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
DDX1Q92499 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX1Q92499 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms