Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.29■■□□□ 1.32
TMEM40Q8WWA1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.29■■□□□ 1.32
TMEM40Q8WWA1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM40Q8WWA1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM40Q8WWA1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM40Q8WWA1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMEM40Q8WWA1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TMEM40Q8WWA1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TMEM40Q8WWA1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMEM40Q8WWA1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.28■■□□□ 1.32
TMEM40Q8WWA1 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.28■■□□□ 1.32
TMEM40Q8WWA1 TERF1P5-201ENST00000477545 1207 ntBASIC23.28■■□□□ 1.32
TMEM40Q8WWA1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.28■■□□□ 1.32
TMEM40Q8WWA1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.28■■□□□ 1.32
TMEM40Q8WWA1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.28■■□□□ 1.32
TMEM40Q8WWA1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TMEM40Q8WWA1 AC080038.3-201ENST00000623346 1952 ntBASIC23.28■■□□□ 1.32
TMEM40Q8WWA1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.28■■□□□ 1.32
TMEM40Q8WWA1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMEM40Q8WWA1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.27■■□□□ 1.32
TMEM40Q8WWA1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.27■■□□□ 1.32
TMEM40Q8WWA1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.27■■□□□ 1.32
TMEM40Q8WWA1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
TMEM40Q8WWA1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TMEM40Q8WWA1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
TMEM40Q8WWA1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.27■■□□□ 1.32
TMEM40Q8WWA1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.27■■□□□ 1.32
TMEM40Q8WWA1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
TMEM40Q8WWA1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.26■■□□□ 1.31
TMEM40Q8WWA1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM40Q8WWA1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.26■■□□□ 1.31
TMEM40Q8WWA1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM40Q8WWA1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.26■■□□□ 1.31
TMEM40Q8WWA1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
TMEM40Q8WWA1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM40Q8WWA1 AC013268.1-206ENST00000638368 961 ntBASIC23.26■■□□□ 1.31
TMEM40Q8WWA1 AC112229.1-201ENST00000639295 961 ntBASIC23.26■■□□□ 1.31
TMEM40Q8WWA1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM40Q8WWA1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.26■■□□□ 1.31
TMEM40Q8WWA1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM40Q8WWA1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM40Q8WWA1 AC068338.2-201ENST00000563278 1430 ntBASIC23.25■■□□□ 1.31
TMEM40Q8WWA1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM40Q8WWA1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM40Q8WWA1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.25■■□□□ 1.31
TMEM40Q8WWA1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TMEM40Q8WWA1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.25■■□□□ 1.31
TMEM40Q8WWA1 AC133552.2-202ENST00000575694 574 ntBASIC23.25■■□□□ 1.31
TMEM40Q8WWA1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.25■■□□□ 1.31
TMEM40Q8WWA1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM40Q8WWA1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM40Q8WWA1 AC003102.1-202ENST00000563394 1796 ntBASIC23.24■■□□□ 1.31
TMEM40Q8WWA1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TMEM40Q8WWA1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM40Q8WWA1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM40Q8WWA1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM40Q8WWA1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
TMEM40Q8WWA1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM40Q8WWA1 ABHD17AP1-201ENST00000358206 933 ntBASIC23.24■■□□□ 1.31
TMEM40Q8WWA1 AF201337.1-201ENST00000520239 748 ntBASIC23.24■■□□□ 1.31
TMEM40Q8WWA1 AC105036.2-201ENST00000569468 176 ntBASIC23.24■■□□□ 1.31
TMEM40Q8WWA1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
TMEM40Q8WWA1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.24■■□□□ 1.31
TMEM40Q8WWA1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM40Q8WWA1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM40Q8WWA1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM40Q8WWA1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM40Q8WWA1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM40Q8WWA1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM40Q8WWA1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.23■■□□□ 1.31
TMEM40Q8WWA1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
TMEM40Q8WWA1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.23■■□□□ 1.31
TMEM40Q8WWA1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TMEM40Q8WWA1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.23■■□□□ 1.31
TMEM40Q8WWA1 AC098934.4-201ENST00000564127 592 ntBASIC23.23■■□□□ 1.31
TMEM40Q8WWA1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM40Q8WWA1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.23■■□□□ 1.31
TMEM40Q8WWA1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
TMEM40Q8WWA1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
TMEM40Q8WWA1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM40Q8WWA1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
TMEM40Q8WWA1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TMEM40Q8WWA1 AC026471.6-201ENST00000622954 1905 ntBASIC23.22■■□□□ 1.31
TMEM40Q8WWA1 CYP2T1P-201ENST00000432607 1285 ntBASIC23.22■■□□□ 1.31
TMEM40Q8WWA1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.22■■□□□ 1.31
TMEM40Q8WWA1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.22■■□□□ 1.31
TMEM40Q8WWA1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.22■■□□□ 1.31
TMEM40Q8WWA1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TMEM40Q8WWA1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TMEM40Q8WWA1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TMEM40Q8WWA1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM40Q8WWA1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM40Q8WWA1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM40Q8WWA1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM40Q8WWA1 SLC29A4P1-201ENST00000398760 971 ntBASIC23.21■■□□□ 1.31
TMEM40Q8WWA1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.21■■□□□ 1.31
TMEM40Q8WWA1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
TMEM40Q8WWA1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.21■■□□□ 1.31
TMEM40Q8WWA1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.21■■□□□ 1.31
TMEM40Q8WWA1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms