Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
RNF139Q8WU17 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF139Q8WU17 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF139Q8WU17 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF139Q8WU17 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF139Q8WU17 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF139Q8WU17 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.35■■□□□ 1.17
RNF139Q8WU17 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.35■■□□□ 1.17
RNF139Q8WU17 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.35■■□□□ 1.17
RNF139Q8WU17 AC104564.3-201ENST00000582367 638 ntBASIC22.35■■□□□ 1.17
RNF139Q8WU17 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.35■■□□□ 1.17
RNF139Q8WU17 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.35■■□□□ 1.17
RNF139Q8WU17 AP006587.3-201ENST00000525742 1516 ntBASIC22.35■■□□□ 1.17
RNF139Q8WU17 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.35■■□□□ 1.17
RNF139Q8WU17 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RNF139Q8WU17 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF139Q8WU17 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
RNF139Q8WU17 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.34■■□□□ 1.17
RNF139Q8WU17 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RNF139Q8WU17 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF139Q8WU17 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF139Q8WU17 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
RNF139Q8WU17 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.34■■□□□ 1.17
RNF139Q8WU17 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.34■■□□□ 1.17
RNF139Q8WU17 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
RNF139Q8WU17 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF139Q8WU17 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF139Q8WU17 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
RNF139Q8WU17 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF139Q8WU17 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF139Q8WU17 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.33■■□□□ 1.17
RNF139Q8WU17 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF139Q8WU17 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF139Q8WU17 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.33■■□□□ 1.17
RNF139Q8WU17 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.33■■□□□ 1.17
RNF139Q8WU17 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF139Q8WU17 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
RNF139Q8WU17 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.33■■□□□ 1.16
RNF139Q8WU17 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RNF139Q8WU17 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
RNF139Q8WU17 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RNF139Q8WU17 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
RNF139Q8WU17 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RNF139Q8WU17 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF139Q8WU17 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF139Q8WU17 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF139Q8WU17 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF139Q8WU17 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF139Q8WU17 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF139Q8WU17 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF139Q8WU17 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
RNF139Q8WU17 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
RNF139Q8WU17 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF139Q8WU17 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF139Q8WU17 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.32■■□□□ 1.16
RNF139Q8WU17 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.32■■□□□ 1.16
RNF139Q8WU17 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF139Q8WU17 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF139Q8WU17 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF139Q8WU17 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.31■■□□□ 1.16
RNF139Q8WU17 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF139Q8WU17 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF139Q8WU17 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF139Q8WU17 KRT87P-202ENST00000534226 1464 ntBASIC22.31■■□□□ 1.16
RNF139Q8WU17 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
RNF139Q8WU17 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.31■■□□□ 1.16
RNF139Q8WU17 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF139Q8WU17 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.31■■□□□ 1.16
RNF139Q8WU17 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.31■■□□□ 1.16
RNF139Q8WU17 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.31■■□□□ 1.16
RNF139Q8WU17 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.31■■□□□ 1.16
RNF139Q8WU17 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
RNF139Q8WU17 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF139Q8WU17 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.31■■□□□ 1.16
RNF139Q8WU17 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.31■■□□□ 1.16
RNF139Q8WU17 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.31■■□□□ 1.16
RNF139Q8WU17 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF139Q8WU17 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
RNF139Q8WU17 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RNF139Q8WU17 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF139Q8WU17 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF139Q8WU17 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.31■■□□□ 1.16
RNF139Q8WU17 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF139Q8WU17 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF139Q8WU17 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF139Q8WU17 LINC00565-201ENST00000562710 2331 ntBASIC22.3■■□□□ 1.16
RNF139Q8WU17 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF139Q8WU17 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RNF139Q8WU17 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF139Q8WU17 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.3■■□□□ 1.16
RNF139Q8WU17 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF139Q8WU17 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RNF139Q8WU17 AC004854.2-201ENST00000608450 1441 ntBASIC22.3■■□□□ 1.16
RNF139Q8WU17 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF139Q8WU17 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
RNF139Q8WU17 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
RNF139Q8WU17 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF139Q8WU17 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
RNF139Q8WU17 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF139Q8WU17 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms