Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC32.06■■■□□ 2.72
ARHGEF40Q8TER5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC32.06■■■□□ 2.72
ARHGEF40Q8TER5 KRT17P1-201ENST00000399211 1546 ntBASIC32.06■■■□□ 2.72
ARHGEF40Q8TER5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC32.06■■■□□ 2.72
ARHGEF40Q8TER5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC32.06■■■□□ 2.72
ARHGEF40Q8TER5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC32.06■■■□□ 2.72
ARHGEF40Q8TER5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC32.06■■■□□ 2.72
ARHGEF40Q8TER5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC32.06■■■□□ 2.72
ARHGEF40Q8TER5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
ARHGEF40Q8TER5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC32.05■■■□□ 2.72
ARHGEF40Q8TER5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
ARHGEF40Q8TER5 AL034346.1-201ENST00000568244 1277 ntBASIC32.05■■■□□ 2.72
ARHGEF40Q8TER5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC32.05■■■□□ 2.72
ARHGEF40Q8TER5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC32.05■■■□□ 2.72
ARHGEF40Q8TER5 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
ARHGEF40Q8TER5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
ARHGEF40Q8TER5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
ARHGEF40Q8TER5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
ARHGEF40Q8TER5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
ARHGEF40Q8TER5 HLA-B-256ENST00000639848 1089 ntBASIC32.05■■■□□ 2.72
ARHGEF40Q8TER5 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
ARHGEF40Q8TER5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
ARHGEF40Q8TER5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
ARHGEF40Q8TER5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC32.04■■■□□ 2.72
ARHGEF40Q8TER5 AC243732.1-201ENST00000612648 864 ntBASIC32.04■■■□□ 2.72
ARHGEF40Q8TER5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
ARHGEF40Q8TER5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC32.04■■■□□ 2.72
ARHGEF40Q8TER5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC32.04■■■□□ 2.72
ARHGEF40Q8TER5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC32.03■■■□□ 2.72
ARHGEF40Q8TER5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
ARHGEF40Q8TER5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
ARHGEF40Q8TER5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC32.03■■■□□ 2.72
ARHGEF40Q8TER5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC32.03■■■□□ 2.72
ARHGEF40Q8TER5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
ARHGEF40Q8TER5 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
ARHGEF40Q8TER5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC32.02■■■□□ 2.72
ARHGEF40Q8TER5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
ARHGEF40Q8TER5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
ARHGEF40Q8TER5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC32.02■■■□□ 2.72
ARHGEF40Q8TER5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC32.02■■■□□ 2.72
ARHGEF40Q8TER5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
ARHGEF40Q8TER5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC32.02■■■□□ 2.72
ARHGEF40Q8TER5 KRT16P2-201ENST00000414673 1423 ntBASIC32.02■■■□□ 2.72
ARHGEF40Q8TER5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.72
ARHGEF40Q8TER5 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC32.01■■■□□ 2.72
ARHGEF40Q8TER5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC32.01■■■□□ 2.72
ARHGEF40Q8TER5 AL591742.1-201ENST00000604433 565 ntBASIC32.01■■■□□ 2.72
ARHGEF40Q8TER5 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.72
ARHGEF40Q8TER5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.71
ARHGEF40Q8TER5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.71
ARHGEF40Q8TER5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
ARHGEF40Q8TER5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
ARHGEF40Q8TER5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
ARHGEF40Q8TER5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
ARHGEF40Q8TER5 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC32■■■□□ 2.71
ARHGEF40Q8TER5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC32■■■□□ 2.71
ARHGEF40Q8TER5 AC079089.2-201ENST00000531211 1277 ntBASIC32■■■□□ 2.71
ARHGEF40Q8TER5 PNMA6B-201ENST00000538162 1200 ntBASIC32■■■□□ 2.71
ARHGEF40Q8TER5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC32■■■□□ 2.71
ARHGEF40Q8TER5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC32■■■□□ 2.71
ARHGEF40Q8TER5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC32■■■□□ 2.71
ARHGEF40Q8TER5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC32■■■□□ 2.71
ARHGEF40Q8TER5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
ARHGEF40Q8TER5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC32■■■□□ 2.71
ARHGEF40Q8TER5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
ARHGEF40Q8TER5 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
ARHGEF40Q8TER5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC32■■■□□ 2.71
ARHGEF40Q8TER5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC32■■■□□ 2.71
ARHGEF40Q8TER5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC32■■■□□ 2.71
ARHGEF40Q8TER5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
ARHGEF40Q8TER5 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
ARHGEF40Q8TER5 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
ARHGEF40Q8TER5 NME6-213ENST00000451657 871 ntTSL 2 BASIC31.99■■■□□ 2.71
ARHGEF40Q8TER5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC31.99■■■□□ 2.71
ARHGEF40Q8TER5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
ARHGEF40Q8TER5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC31.99■■■□□ 2.71
ARHGEF40Q8TER5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
ARHGEF40Q8TER5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC31.98■■■□□ 2.71
ARHGEF40Q8TER5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
ARHGEF40Q8TER5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC31.98■■■□□ 2.71
ARHGEF40Q8TER5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC31.98■■■□□ 2.71
ARHGEF40Q8TER5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
ARHGEF40Q8TER5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
ARHGEF40Q8TER5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC31.97■■■□□ 2.71
ARHGEF40Q8TER5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC31.97■■■□□ 2.71
ARHGEF40Q8TER5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
ARHGEF40Q8TER5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC31.97■■■□□ 2.71
ARHGEF40Q8TER5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
ARHGEF40Q8TER5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC31.97■■■□□ 2.71
ARHGEF40Q8TER5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC31.97■■■□□ 2.71
ARHGEF40Q8TER5 AC120498.10-201ENST00000621827 505 ntBASIC31.97■■■□□ 2.71
ARHGEF40Q8TER5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC31.97■■■□□ 2.71
ARHGEF40Q8TER5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
ARHGEF40Q8TER5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
ARHGEF40Q8TER5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
ARHGEF40Q8TER5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
ARHGEF40Q8TER5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
ARHGEF40Q8TER5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC31.96■■■□□ 2.71
ARHGEF40Q8TER5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
ARHGEF40Q8TER5 EED-207ENST00000528180 1745 ntTSL 5 BASIC31.96■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms