Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.96■■□□□ 1.59
SMARCC2Q8TAQ2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.96■■□□□ 1.59
SMARCC2Q8TAQ2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
SMARCC2Q8TAQ2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
SMARCC2Q8TAQ2 Z98882.1-201ENST00000622160 2253 ntBASIC24.95■■□□□ 1.58
SMARCC2Q8TAQ2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SMARCC2Q8TAQ2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SMARCC2Q8TAQ2 YBX1P1-201ENST00000445822 960 ntBASIC24.95■■□□□ 1.58
SMARCC2Q8TAQ2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.95■■□□□ 1.58
SMARCC2Q8TAQ2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.95■■□□□ 1.58
SMARCC2Q8TAQ2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
SMARCC2Q8TAQ2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
SMARCC2Q8TAQ2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SMARCC2Q8TAQ2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SMARCC2Q8TAQ2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.94■■□□□ 1.58
SMARCC2Q8TAQ2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC24.94■■□□□ 1.58
SMARCC2Q8TAQ2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
SMARCC2Q8TAQ2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
SMARCC2Q8TAQ2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SMARCC2Q8TAQ2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
SMARCC2Q8TAQ2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.94■■□□□ 1.58
SMARCC2Q8TAQ2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.94■■□□□ 1.58
SMARCC2Q8TAQ2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.94■■□□□ 1.58
SMARCC2Q8TAQ2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC24.94■■□□□ 1.58
SMARCC2Q8TAQ2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SMARCC2Q8TAQ2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.94■■□□□ 1.58
SMARCC2Q8TAQ2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.94■■□□□ 1.58
SMARCC2Q8TAQ2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
SMARCC2Q8TAQ2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
SMARCC2Q8TAQ2 AP004607.7-201ENST00000527152 1677 ntBASIC24.94■■□□□ 1.58
SMARCC2Q8TAQ2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
SMARCC2Q8TAQ2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
SMARCC2Q8TAQ2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SMARCC2Q8TAQ2 AL034346.1-201ENST00000568244 1277 ntBASIC24.93■■□□□ 1.58
SMARCC2Q8TAQ2 SMUG1P1-201ENST00000590640 811 ntBASIC24.93■■□□□ 1.58
SMARCC2Q8TAQ2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SMARCC2Q8TAQ2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.93■■□□□ 1.58
SMARCC2Q8TAQ2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.92■■□□□ 1.58
SMARCC2Q8TAQ2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
SMARCC2Q8TAQ2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SMARCC2Q8TAQ2 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.92■■□□□ 1.58
SMARCC2Q8TAQ2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.92■■□□□ 1.58
SMARCC2Q8TAQ2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SMARCC2Q8TAQ2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.92■■□□□ 1.58
SMARCC2Q8TAQ2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.92■■□□□ 1.58
SMARCC2Q8TAQ2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
SMARCC2Q8TAQ2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SMARCC2Q8TAQ2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SMARCC2Q8TAQ2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
SMARCC2Q8TAQ2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SMARCC2Q8TAQ2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SMARCC2Q8TAQ2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SMARCC2Q8TAQ2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SMARCC2Q8TAQ2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC24.91■■□□□ 1.58
SMARCC2Q8TAQ2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.9■■□□□ 1.58
SMARCC2Q8TAQ2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
SMARCC2Q8TAQ2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.89■■□□□ 1.58
SMARCC2Q8TAQ2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
SMARCC2Q8TAQ2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
SMARCC2Q8TAQ2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SMARCC2Q8TAQ2 AC123595.1-201ENST00000440769 1046 ntBASIC24.89■■□□□ 1.58
SMARCC2Q8TAQ2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.89■■□□□ 1.58
SMARCC2Q8TAQ2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.89■■□□□ 1.58
SMARCC2Q8TAQ2 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.89■■□□□ 1.58
SMARCC2Q8TAQ2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.89■■□□□ 1.57
SMARCC2Q8TAQ2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
SMARCC2Q8TAQ2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SMARCC2Q8TAQ2 AC003102.1-202ENST00000563394 1796 ntBASIC24.88■■□□□ 1.57
SMARCC2Q8TAQ2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SMARCC2Q8TAQ2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.88■■□□□ 1.57
SMARCC2Q8TAQ2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.88■■□□□ 1.57
SMARCC2Q8TAQ2 AC104564.3-201ENST00000582367 638 ntBASIC24.88■■□□□ 1.57
SMARCC2Q8TAQ2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC2Q8TAQ2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC2Q8TAQ2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC2Q8TAQ2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC2Q8TAQ2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC2Q8TAQ2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC2Q8TAQ2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC24.87■■□□□ 1.57
SMARCC2Q8TAQ2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms