Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DNAAF1Q8NEP3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DNAAF1Q8NEP3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DNAAF1Q8NEP3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.65■□□□□ 0.58
DNAAF1Q8NEP3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
DNAAF1Q8NEP3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DNAAF1Q8NEP3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DNAAF1Q8NEP3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
DNAAF1Q8NEP3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DNAAF1Q8NEP3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DNAAF1Q8NEP3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
DNAAF1Q8NEP3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DNAAF1Q8NEP3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.64■□□□□ 0.57
DNAAF1Q8NEP3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
DNAAF1Q8NEP3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DNAAF1Q8NEP3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DNAAF1Q8NEP3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.64■□□□□ 0.57
DNAAF1Q8NEP3 AL031602.1-201ENST00000633169 911 ntBASIC18.64■□□□□ 0.57
DNAAF1Q8NEP3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.64■□□□□ 0.57
DNAAF1Q8NEP3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DNAAF1Q8NEP3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
DNAAF1Q8NEP3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DNAAF1Q8NEP3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
DNAAF1Q8NEP3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DNAAF1Q8NEP3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DNAAF1Q8NEP3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DNAAF1Q8NEP3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DNAAF1Q8NEP3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DNAAF1Q8NEP3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 AC092171.4-201ENST00000609130 632 ntBASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 pRNA.6-201ENST00000610482 90 ntBASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 pRNA.5-201ENST00000612139 90 ntBASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 pRNA.11-201ENST00000618423 90 ntBASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 pRNA.13-201ENST00000619112 90 ntBASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DNAAF1Q8NEP3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.62■□□□□ 0.57
DNAAF1Q8NEP3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DNAAF1Q8NEP3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.62■□□□□ 0.57
DNAAF1Q8NEP3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DNAAF1Q8NEP3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DNAAF1Q8NEP3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DNAAF1Q8NEP3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNAAF1Q8NEP3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNAAF1Q8NEP3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNAAF1Q8NEP3 AC006455.2-201ENST00000429931 906 ntBASIC18.61■□□□□ 0.57
DNAAF1Q8NEP3 AC099791.2-201ENST00000605725 427 ntBASIC18.61■□□□□ 0.57
DNAAF1Q8NEP3 AC068587.7-201ENST00000641602 218 ntBASIC18.61■□□□□ 0.57
DNAAF1Q8NEP3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNAAF1Q8NEP3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNAAF1Q8NEP3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
DNAAF1Q8NEP3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
DNAAF1Q8NEP3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNAAF1Q8NEP3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNAAF1Q8NEP3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
DNAAF1Q8NEP3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.59■□□□□ 0.57
DNAAF1Q8NEP3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNAAF1Q8NEP3 SRD5A1P1-201ENST00000442297 786 ntBASIC18.59■□□□□ 0.57
DNAAF1Q8NEP3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DNAAF1Q8NEP3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.59■□□□□ 0.57
DNAAF1Q8NEP3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNAAF1Q8NEP3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNAAF1Q8NEP3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 307.2 ms