Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PIK3C3Q8NEB9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PIK3C3Q8NEB9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PIK3C3Q8NEB9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
PIK3C3Q8NEB9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PIK3C3Q8NEB9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.86■□□□□ 0.77
PIK3C3Q8NEB9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PIK3C3Q8NEB9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.86■□□□□ 0.77
PIK3C3Q8NEB9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.86■□□□□ 0.77
PIK3C3Q8NEB9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PIK3C3Q8NEB9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PIK3C3Q8NEB9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PIK3C3Q8NEB9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PIK3C3Q8NEB9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PIK3C3Q8NEB9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PIK3C3Q8NEB9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.85■□□□□ 0.77
PIK3C3Q8NEB9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PIK3C3Q8NEB9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PIK3C3Q8NEB9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.85■□□□□ 0.77
PIK3C3Q8NEB9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PIK3C3Q8NEB9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PIK3C3Q8NEB9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.85■□□□□ 0.77
PIK3C3Q8NEB9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PIK3C3Q8NEB9 AC241377.3-202ENST00000626088 1088 ntBASIC19.85■□□□□ 0.77
PIK3C3Q8NEB9 AC241585.3-202ENST00000628937 1088 ntBASIC19.85■□□□□ 0.77
PIK3C3Q8NEB9 AC245100.8-202ENST00000629247 1058 ntBASIC19.85■□□□□ 0.77
PIK3C3Q8NEB9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.85■□□□□ 0.77
PIK3C3Q8NEB9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PIK3C3Q8NEB9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PIK3C3Q8NEB9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PIK3C3Q8NEB9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PIK3C3Q8NEB9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PIK3C3Q8NEB9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PIK3C3Q8NEB9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.84■□□□□ 0.77
PIK3C3Q8NEB9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PIK3C3Q8NEB9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
PIK3C3Q8NEB9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PIK3C3Q8NEB9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PIK3C3Q8NEB9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.84■□□□□ 0.77
PIK3C3Q8NEB9 AC079089.2-201ENST00000531211 1277 ntBASIC19.84■□□□□ 0.77
PIK3C3Q8NEB9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PIK3C3Q8NEB9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.84■□□□□ 0.77
PIK3C3Q8NEB9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PIK3C3Q8NEB9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PIK3C3Q8NEB9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
PIK3C3Q8NEB9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PIK3C3Q8NEB9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PIK3C3Q8NEB9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PIK3C3Q8NEB9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.83■□□□□ 0.77
PIK3C3Q8NEB9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PIK3C3Q8NEB9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.83■□□□□ 0.77
PIK3C3Q8NEB9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PIK3C3Q8NEB9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PIK3C3Q8NEB9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PIK3C3Q8NEB9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PIK3C3Q8NEB9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.83■□□□□ 0.77
PIK3C3Q8NEB9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PIK3C3Q8NEB9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PIK3C3Q8NEB9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.83■□□□□ 0.77
PIK3C3Q8NEB9 AC131212.1-201ENST00000613771 668 ntBASIC19.83■□□□□ 0.77
PIK3C3Q8NEB9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
PIK3C3Q8NEB9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PIK3C3Q8NEB9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PIK3C3Q8NEB9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PIK3C3Q8NEB9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.83■□□□□ 0.76
PIK3C3Q8NEB9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PIK3C3Q8NEB9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PIK3C3Q8NEB9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
PIK3C3Q8NEB9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.83■□□□□ 0.76
PIK3C3Q8NEB9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.83■□□□□ 0.76
PIK3C3Q8NEB9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PIK3C3Q8NEB9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PIK3C3Q8NEB9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.81■□□□□ 0.76
PIK3C3Q8NEB9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.81■□□□□ 0.76
PIK3C3Q8NEB9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PIK3C3Q8NEB9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.81■□□□□ 0.76
PIK3C3Q8NEB9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.81■□□□□ 0.76
PIK3C3Q8NEB9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.81■□□□□ 0.76
PIK3C3Q8NEB9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms