Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ZNF439Q8NDP4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ZNF439Q8NDP4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF439Q8NDP4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.59■□□□□ 0.41
ZNF439Q8NDP4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
ZNF439Q8NDP4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF439Q8NDP4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF439Q8NDP4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF439Q8NDP4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF439Q8NDP4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF439Q8NDP4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF439Q8NDP4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF439Q8NDP4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
ZNF439Q8NDP4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.58■□□□□ 0.4
ZNF439Q8NDP4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF439Q8NDP4 AC026471.6-201ENST00000622954 1905 ntBASIC17.58■□□□□ 0.4
ZNF439Q8NDP4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF439Q8NDP4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 EDA-201ENST00000338901 1233 ntBASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 AP001330.3-201ENST00000520123 633 ntBASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 IGHV3-19-201ENST00000521488 291 ntBASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 AL034346.1-201ENST00000568244 1277 ntBASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 AC126544.1-201ENST00000580842 1059 ntBASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 AC008764.7-201ENST00000593779 1081 ntBASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF439Q8NDP4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 AC099791.1-201ENST00000416440 715 ntBASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 AC027682.1-201ENST00000562846 899 ntBASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ZNF439Q8NDP4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 SMUG1P1-201ENST00000590640 811 ntBASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 AP004607.7-201ENST00000527152 1677 ntBASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF439Q8NDP4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNF439Q8NDP4 AC244015.2-201ENST00000616358 1861 ntBASIC17.54■□□□□ 0.4
ZNF439Q8NDP4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF439Q8NDP4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF439Q8NDP4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNF439Q8NDP4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNF439Q8NDP4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
ZNF439Q8NDP4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF439Q8NDP4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF439Q8NDP4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ZNF439Q8NDP4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms