Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC33.59■■■□□ 2.97
CFAP43Q8NDM7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC33.59■■■□□ 2.97
CFAP43Q8NDM7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC33.59■■■□□ 2.97
CFAP43Q8NDM7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
CFAP43Q8NDM7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC33.58■■■□□ 2.97
CFAP43Q8NDM7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
CFAP43Q8NDM7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
CFAP43Q8NDM7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC33.58■■■□□ 2.97
CFAP43Q8NDM7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
CFAP43Q8NDM7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC33.58■■■□□ 2.97
CFAP43Q8NDM7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC33.58■■■□□ 2.97
CFAP43Q8NDM7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
CFAP43Q8NDM7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC33.58■■■□□ 2.97
CFAP43Q8NDM7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
CFAP43Q8NDM7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.97
CFAP43Q8NDM7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC33.57■■■□□ 2.97
CFAP43Q8NDM7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC33.57■■■□□ 2.96
CFAP43Q8NDM7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
CFAP43Q8NDM7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
CFAP43Q8NDM7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC33.57■■■□□ 2.96
CFAP43Q8NDM7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
CFAP43Q8NDM7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
CFAP43Q8NDM7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC33.56■■■□□ 2.96
CFAP43Q8NDM7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC33.56■■■□□ 2.96
CFAP43Q8NDM7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC33.56■■■□□ 2.96
CFAP43Q8NDM7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
CFAP43Q8NDM7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC33.55■■■□□ 2.96
CFAP43Q8NDM7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC33.55■■■□□ 2.96
CFAP43Q8NDM7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC33.55■■■□□ 2.96
CFAP43Q8NDM7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
CFAP43Q8NDM7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
CFAP43Q8NDM7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
CFAP43Q8NDM7 AC142381.4-202ENST00000563973 229 ntBASIC33.55■■■□□ 2.96
CFAP43Q8NDM7 OR10C1-204ENST00000622521 1039 ntBASIC33.55■■■□□ 2.96
CFAP43Q8NDM7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC33.55■■■□□ 2.96
CFAP43Q8NDM7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC33.54■■■□□ 2.96
CFAP43Q8NDM7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
CFAP43Q8NDM7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
CFAP43Q8NDM7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC33.54■■■□□ 2.96
CFAP43Q8NDM7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC33.54■■■□□ 2.96
CFAP43Q8NDM7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC33.54■■■□□ 2.96
CFAP43Q8NDM7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC33.54■■■□□ 2.96
CFAP43Q8NDM7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
CFAP43Q8NDM7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
CFAP43Q8NDM7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC33.53■■■□□ 2.96
CFAP43Q8NDM7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC33.53■■■□□ 2.96
CFAP43Q8NDM7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC33.53■■■□□ 2.96
CFAP43Q8NDM7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC33.53■■■□□ 2.96
CFAP43Q8NDM7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC33.52■■■□□ 2.96
CFAP43Q8NDM7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
CFAP43Q8NDM7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
CFAP43Q8NDM7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC33.52■■■□□ 2.96
CFAP43Q8NDM7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC33.52■■■□□ 2.96
CFAP43Q8NDM7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC33.52■■■□□ 2.96
CFAP43Q8NDM7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC33.52■■■□□ 2.96
CFAP43Q8NDM7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC33.52■■■□□ 2.96
CFAP43Q8NDM7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC33.52■■■□□ 2.96
CFAP43Q8NDM7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
CFAP43Q8NDM7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC33.52■■■□□ 2.96
CFAP43Q8NDM7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
CFAP43Q8NDM7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC33.51■■■□□ 2.96
CFAP43Q8NDM7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC33.51■■■□□ 2.96
CFAP43Q8NDM7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
CFAP43Q8NDM7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
CFAP43Q8NDM7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
CFAP43Q8NDM7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
CFAP43Q8NDM7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC33.51■■■□□ 2.95
CFAP43Q8NDM7 AL158047.1-201ENST00000445918 881 ntBASIC33.51■■■□□ 2.95
CFAP43Q8NDM7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC33.51■■■□□ 2.95
CFAP43Q8NDM7 AC016405.3-201ENST00000607710 860 ntBASIC33.51■■■□□ 2.95
CFAP43Q8NDM7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC33.51■■■□□ 2.95
CFAP43Q8NDM7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CFAP43Q8NDM7 AC139530.1-201ENST00000575312 1977 ntBASIC33.5■■■□□ 2.95
CFAP43Q8NDM7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CFAP43Q8NDM7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
CFAP43Q8NDM7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC33.5■■■□□ 2.95
CFAP43Q8NDM7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC33.5■■■□□ 2.95
CFAP43Q8NDM7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC33.5■■■□□ 2.95
CFAP43Q8NDM7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC33.5■■■□□ 2.95
CFAP43Q8NDM7 AC093787.1-201ENST00000450396 207 ntBASIC33.5■■■□□ 2.95
CFAP43Q8NDM7 UNC93B4-201ENST00000505679 747 ntBASIC33.5■■■□□ 2.95
CFAP43Q8NDM7 EEF1DP3-203ENST00000566025 782 ntBASIC33.5■■■□□ 2.95
CFAP43Q8NDM7 USP36-216ENST00000589424 970 ntTSL 5 BASIC33.5■■■□□ 2.95
CFAP43Q8NDM7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CFAP43Q8NDM7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CFAP43Q8NDM7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC33.5■■■□□ 2.95
CFAP43Q8NDM7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC33.5■■■□□ 2.95
CFAP43Q8NDM7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CFAP43Q8NDM7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
CFAP43Q8NDM7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
CFAP43Q8NDM7 AC006058.3-201ENST00000606217 1069 ntBASIC33.49■■■□□ 2.95
CFAP43Q8NDM7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
CFAP43Q8NDM7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC33.49■■■□□ 2.95
CFAP43Q8NDM7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
CFAP43Q8NDM7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
CFAP43Q8NDM7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
CFAP43Q8NDM7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
CFAP43Q8NDM7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC33.49■■■□□ 2.95
CFAP43Q8NDM7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC33.49■■■□□ 2.95
CFAP43Q8NDM7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC33.48■■■□□ 2.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms