Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 MIR663A-201ENST00000385250 93 ntBASIC25.14■■□□□ 1.62
SLC44A5Q8NCS7 SLC7A5P2-201ENST00000553010 536 ntBASIC25.14■■□□□ 1.62
SLC44A5Q8NCS7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC25.14■■□□□ 1.62
SLC44A5Q8NCS7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SLC44A5Q8NCS7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.14■■□□□ 1.61
SLC44A5Q8NCS7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC25.14■■□□□ 1.61
SLC44A5Q8NCS7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.13■■□□□ 1.61
SLC44A5Q8NCS7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SLC44A5Q8NCS7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SLC44A5Q8NCS7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SLC44A5Q8NCS7 AC003102.1-202ENST00000563394 1796 ntBASIC25.13■■□□□ 1.61
SLC44A5Q8NCS7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SLC44A5Q8NCS7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SLC44A5Q8NCS7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
SLC44A5Q8NCS7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC25.13■■□□□ 1.61
SLC44A5Q8NCS7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC25.13■■□□□ 1.61
SLC44A5Q8NCS7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.13■■□□□ 1.61
SLC44A5Q8NCS7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.13■■□□□ 1.61
SLC44A5Q8NCS7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SLC44A5Q8NCS7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.13■■□□□ 1.61
SLC44A5Q8NCS7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SLC44A5Q8NCS7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.12■■□□□ 1.61
SLC44A5Q8NCS7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SLC44A5Q8NCS7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
SLC44A5Q8NCS7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.12■■□□□ 1.61
SLC44A5Q8NCS7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.12■■□□□ 1.61
SLC44A5Q8NCS7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
SLC44A5Q8NCS7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SLC44A5Q8NCS7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC25.12■■□□□ 1.61
SLC44A5Q8NCS7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC25.12■■□□□ 1.61
SLC44A5Q8NCS7 AL050303.2-201ENST00000619798 666 ntBASIC25.12■■□□□ 1.61
SLC44A5Q8NCS7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.12■■□□□ 1.61
SLC44A5Q8NCS7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
SLC44A5Q8NCS7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.12■■□□□ 1.61
SLC44A5Q8NCS7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC44A5Q8NCS7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SLC44A5Q8NCS7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC44A5Q8NCS7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC44A5Q8NCS7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SLC44A5Q8NCS7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC25.11■■□□□ 1.61
SLC44A5Q8NCS7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.11■■□□□ 1.61
SLC44A5Q8NCS7 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.11■■□□□ 1.61
SLC44A5Q8NCS7 AC006970.2-201ENST00000450065 779 ntBASIC25.11■■□□□ 1.61
SLC44A5Q8NCS7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SLC44A5Q8NCS7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC44A5Q8NCS7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC25.11■■□□□ 1.61
SLC44A5Q8NCS7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC25.11■■□□□ 1.61
SLC44A5Q8NCS7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SLC44A5Q8NCS7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC44A5Q8NCS7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC44A5Q8NCS7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SLC44A5Q8NCS7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.11■■□□□ 1.61
SLC44A5Q8NCS7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.1■■□□□ 1.61
SLC44A5Q8NCS7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SLC44A5Q8NCS7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SLC44A5Q8NCS7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
SLC44A5Q8NCS7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.1■■□□□ 1.61
SLC44A5Q8NCS7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC25.1■■□□□ 1.61
SLC44A5Q8NCS7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
SLC44A5Q8NCS7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
SLC44A5Q8NCS7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC25.1■■□□□ 1.61
SLC44A5Q8NCS7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.1■■□□□ 1.61
SLC44A5Q8NCS7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25.1■■□□□ 1.61
SLC44A5Q8NCS7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.1■■□□□ 1.61
SLC44A5Q8NCS7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SLC44A5Q8NCS7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SLC44A5Q8NCS7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
SLC44A5Q8NCS7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.09■■□□□ 1.61
SLC44A5Q8NCS7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SLC44A5Q8NCS7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SLC44A5Q8NCS7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SLC44A5Q8NCS7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC25.09■■□□□ 1.61
SLC44A5Q8NCS7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC25.09■■□□□ 1.61
SLC44A5Q8NCS7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SLC44A5Q8NCS7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.09■■□□□ 1.61
SLC44A5Q8NCS7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SLC44A5Q8NCS7 AC068473.5-201ENST00000616428 2072 ntBASIC25.09■■□□□ 1.61
SLC44A5Q8NCS7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.09■■□□□ 1.61
SLC44A5Q8NCS7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SLC44A5Q8NCS7 CNN2P6-201ENST00000439038 900 ntBASIC25.08■■□□□ 1.61
SLC44A5Q8NCS7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC25.08■■□□□ 1.61
SLC44A5Q8NCS7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC25.08■■□□□ 1.61
SLC44A5Q8NCS7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC25.08■■□□□ 1.61
SLC44A5Q8NCS7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC25.08■■□□□ 1.61
SLC44A5Q8NCS7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SLC44A5Q8NCS7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
SLC44A5Q8NCS7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
SLC44A5Q8NCS7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.07■■□□□ 1.6
SLC44A5Q8NCS7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SLC44A5Q8NCS7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SLC44A5Q8NCS7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SLC44A5Q8NCS7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC25.07■■□□□ 1.6
SLC44A5Q8NCS7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SLC44A5Q8NCS7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SLC44A5Q8NCS7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SLC44A5Q8NCS7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SLC44A5Q8NCS7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC25.07■■□□□ 1.6
SLC44A5Q8NCS7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC25.07■■□□□ 1.6
SLC44A5Q8NCS7 AC104771.1-201ENST00000603335 964 ntBASIC25.07■■□□□ 1.6
SLC44A5Q8NCS7 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 381.1 ms