Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZIC4Q8N9L1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZIC4Q8N9L1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZIC4Q8N9L1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZIC4Q8N9L1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZIC4Q8N9L1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZIC4Q8N9L1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.89■□□□□ 0.61
ZIC4Q8N9L1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.89■□□□□ 0.61
ZIC4Q8N9L1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ZIC4Q8N9L1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZIC4Q8N9L1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ZIC4Q8N9L1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZIC4Q8N9L1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZIC4Q8N9L1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.88■□□□□ 0.61
ZIC4Q8N9L1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.88■□□□□ 0.61
ZIC4Q8N9L1 MIR935-201ENST00000401179 91 ntBASIC18.88■□□□□ 0.61
ZIC4Q8N9L1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZIC4Q8N9L1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.88■□□□□ 0.61
ZIC4Q8N9L1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.88■□□□□ 0.61
ZIC4Q8N9L1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZIC4Q8N9L1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZIC4Q8N9L1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.87■□□□□ 0.61
ZIC4Q8N9L1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.87■□□□□ 0.61
ZIC4Q8N9L1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZIC4Q8N9L1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZIC4Q8N9L1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZIC4Q8N9L1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ZIC4Q8N9L1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZIC4Q8N9L1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.87■□□□□ 0.61
ZIC4Q8N9L1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZIC4Q8N9L1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZIC4Q8N9L1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.87■□□□□ 0.61
ZIC4Q8N9L1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.87■□□□□ 0.61
ZIC4Q8N9L1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.86■□□□□ 0.61
ZIC4Q8N9L1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZIC4Q8N9L1 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.86■□□□□ 0.61
ZIC4Q8N9L1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZIC4Q8N9L1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZIC4Q8N9L1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZIC4Q8N9L1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.86■□□□□ 0.61
ZIC4Q8N9L1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZIC4Q8N9L1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.86■□□□□ 0.61
ZIC4Q8N9L1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.86■□□□□ 0.61
ZIC4Q8N9L1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZIC4Q8N9L1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZIC4Q8N9L1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZIC4Q8N9L1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZIC4Q8N9L1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ZIC4Q8N9L1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZIC4Q8N9L1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZIC4Q8N9L1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.85■□□□□ 0.61
ZIC4Q8N9L1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZIC4Q8N9L1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ZIC4Q8N9L1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZIC4Q8N9L1 AC034268.1-201ENST00000441047 882 ntBASIC18.85■□□□□ 0.61
ZIC4Q8N9L1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.85■□□□□ 0.61
ZIC4Q8N9L1 AC104564.3-201ENST00000582367 638 ntBASIC18.85■□□□□ 0.61
ZIC4Q8N9L1 KRT18P61-201ENST00000585825 1298 ntBASIC18.85■□□□□ 0.61
ZIC4Q8N9L1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZIC4Q8N9L1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZIC4Q8N9L1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.85■□□□□ 0.61
ZIC4Q8N9L1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZIC4Q8N9L1 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.85■□□□□ 0.61
ZIC4Q8N9L1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZIC4Q8N9L1 KRT87P-202ENST00000534226 1464 ntBASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 EEF1DP3-203ENST00000566025 782 ntBASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 AP004607.4-201ENST00000530158 1459 ntBASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC4Q8N9L1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.83■□□□□ 0.61
ZIC4Q8N9L1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.83■□□□□ 0.61
ZIC4Q8N9L1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.83■□□□□ 0.61
ZIC4Q8N9L1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.83■□□□□ 0.61
ZIC4Q8N9L1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.83■□□□□ 0.6
ZIC4Q8N9L1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC4Q8N9L1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.6
ZIC4Q8N9L1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC4Q8N9L1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
ZIC4Q8N9L1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms