Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AL031602.1-201ENST00000633169 911 ntBASIC19.88■□□□□ 0.77
CCDC71Q8IV32 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.88■□□□□ 0.77
CCDC71Q8IV32 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 LINC01529-204ENST00000636474 1715 ntBASIC19.88■□□□□ 0.77
CCDC71Q8IV32 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC71Q8IV32 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC71Q8IV32 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC71Q8IV32 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC71Q8IV32 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC71Q8IV32 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
CCDC71Q8IV32 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC71Q8IV32 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC71Q8IV32 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC71Q8IV32 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC71Q8IV32 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC71Q8IV32 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CCDC71Q8IV32 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC71Q8IV32 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC71Q8IV32 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC71Q8IV32 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC71Q8IV32 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC71Q8IV32 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC71Q8IV32 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC71Q8IV32 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC71Q8IV32 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC71Q8IV32 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC71Q8IV32 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC71Q8IV32 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC71Q8IV32 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC71Q8IV32 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC71Q8IV32 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CCDC71Q8IV32 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC71Q8IV32 Z98882.1-201ENST00000622160 2253 ntBASIC19.86■□□□□ 0.77
CCDC71Q8IV32 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC71Q8IV32 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC71Q8IV32 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC71Q8IV32 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC71Q8IV32 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC71Q8IV32 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC71Q8IV32 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC71Q8IV32 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC71Q8IV32 YBX1P1-201ENST00000445822 960 ntBASIC19.85■□□□□ 0.77
CCDC71Q8IV32 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC71Q8IV32 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC71Q8IV32 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC71Q8IV32 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC71Q8IV32 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC71Q8IV32 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC71Q8IV32 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC71Q8IV32 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC71Q8IV32 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC71Q8IV32 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC71Q8IV32 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC71Q8IV32 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC71Q8IV32 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC71Q8IV32 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC71Q8IV32 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC71Q8IV32 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC71Q8IV32 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC71Q8IV32 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC71Q8IV32 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.84■□□□□ 0.77
CCDC71Q8IV32 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC71Q8IV32 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC71Q8IV32 IKBKGP1-201ENST00000612193 1073 ntBASIC19.84■□□□□ 0.77
CCDC71Q8IV32 MIR6084-201ENST00000622012 110 ntBASIC19.84■□□□□ 0.77
CCDC71Q8IV32 AC133637.1-201ENST00000624115 1537 ntBASIC19.84■□□□□ 0.77
CCDC71Q8IV32 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC71Q8IV32 FEM1AP4-201ENST00000443167 1987 ntBASIC19.84■□□□□ 0.77
CCDC71Q8IV32 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC71Q8IV32 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC71Q8IV32 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC71Q8IV32 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC71Q8IV32 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC71Q8IV32 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC71Q8IV32 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC71Q8IV32 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC71Q8IV32 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC71Q8IV32 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC71Q8IV32 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC71Q8IV32 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CCDC71Q8IV32 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC71Q8IV32 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC71Q8IV32 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC71Q8IV32 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.83■□□□□ 0.76
CCDC71Q8IV32 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC71Q8IV32 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC71Q8IV32 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.83■□□□□ 0.76
CCDC71Q8IV32 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC71Q8IV32 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC71Q8IV32 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC71Q8IV32 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC71Q8IV32 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms