Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 AC026310.3-201ENST00000625186 2373 ntBASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.36■□□□□ 0.53
COLCA1Q6ZS62 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 MIR6084-201ENST00000622012 110 ntBASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 AC007375.3-201ENST00000600936 2314 ntBASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COLCA1Q6ZS62 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.34■□□□□ 0.53
COLCA1Q6ZS62 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COLCA1Q6ZS62 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COLCA1Q6ZS62 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
COLCA1Q6ZS62 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COLCA1Q6ZS62 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COLCA1Q6ZS62 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COLCA1Q6ZS62 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.34■□□□□ 0.53
COLCA1Q6ZS62 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COLCA1Q6ZS62 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.34■□□□□ 0.53
COLCA1Q6ZS62 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COLCA1Q6ZS62 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COLCA1Q6ZS62 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.34■□□□□ 0.53
COLCA1Q6ZS62 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COLCA1Q6ZS62 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
COLCA1Q6ZS62 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
COLCA1Q6ZS62 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.34■□□□□ 0.53
COLCA1Q6ZS62 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.33■□□□□ 0.53
COLCA1Q6ZS62 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
COLCA1Q6ZS62 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.33■□□□□ 0.53
COLCA1Q6ZS62 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COLCA1Q6ZS62 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COLCA1Q6ZS62 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
COLCA1Q6ZS62 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.33■□□□□ 0.52
COLCA1Q6ZS62 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COLCA1Q6ZS62 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COLCA1Q6ZS62 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.33■□□□□ 0.52
COLCA1Q6ZS62 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COLCA1Q6ZS62 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.33■□□□□ 0.52
COLCA1Q6ZS62 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COLCA1Q6ZS62 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COLCA1Q6ZS62 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COLCA1Q6ZS62 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COLCA1Q6ZS62 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COLCA1Q6ZS62 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COLCA1Q6ZS62 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COLCA1Q6ZS62 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COLCA1Q6ZS62 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COLCA1Q6ZS62 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COLCA1Q6ZS62 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COLCA1Q6ZS62 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COLCA1Q6ZS62 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COLCA1Q6ZS62 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COLCA1Q6ZS62 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COLCA1Q6ZS62 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COLCA1Q6ZS62 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COLCA1Q6ZS62 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.32■□□□□ 0.52
COLCA1Q6ZS62 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.32■□□□□ 0.52
COLCA1Q6ZS62 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.32■□□□□ 0.52
COLCA1Q6ZS62 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.32■□□□□ 0.52
COLCA1Q6ZS62 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.32■□□□□ 0.52
COLCA1Q6ZS62 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.32■□□□□ 0.52
COLCA1Q6ZS62 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
COLCA1Q6ZS62 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COLCA1Q6ZS62 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COLCA1Q6ZS62 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
COLCA1Q6ZS62 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms