Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.89■□□□□ 0.77
RTL4Q6ZR62 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RTL4Q6ZR62 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTL4Q6ZR62 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTL4Q6ZR62 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.88■□□□□ 0.77
RTL4Q6ZR62 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTL4Q6ZR62 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTL4Q6ZR62 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
RTL4Q6ZR62 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RTL4Q6ZR62 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.88■□□□□ 0.77
RTL4Q6ZR62 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTL4Q6ZR62 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RTL4Q6ZR62 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
RTL4Q6ZR62 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTL4Q6ZR62 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.88■□□□□ 0.77
RTL4Q6ZR62 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.88■□□□□ 0.77
RTL4Q6ZR62 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.88■□□□□ 0.77
RTL4Q6ZR62 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTL4Q6ZR62 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTL4Q6ZR62 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RTL4Q6ZR62 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
RTL4Q6ZR62 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.87■□□□□ 0.77
RTL4Q6ZR62 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL4Q6ZR62 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.87■□□□□ 0.77
RTL4Q6ZR62 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTL4Q6ZR62 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL4Q6ZR62 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL4Q6ZR62 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.87■□□□□ 0.77
RTL4Q6ZR62 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL4Q6ZR62 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RTL4Q6ZR62 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTL4Q6ZR62 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTL4Q6ZR62 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RTL4Q6ZR62 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL4Q6ZR62 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 AC092666.2-201ENST00000613287 246 ntBASIC19.86■□□□□ 0.77
RTL4Q6ZR62 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
RTL4Q6ZR62 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL4Q6ZR62 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RTL4Q6ZR62 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL4Q6ZR62 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL4Q6ZR62 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTL4Q6ZR62 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL4Q6ZR62 KRT18P5-201ENST00000436075 1291 ntBASIC19.85■□□□□ 0.77
RTL4Q6ZR62 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTL4Q6ZR62 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.85■□□□□ 0.77
RTL4Q6ZR62 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL4Q6ZR62 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTL4Q6ZR62 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.85■□□□□ 0.77
RTL4Q6ZR62 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL4Q6ZR62 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL4Q6ZR62 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTL4Q6ZR62 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RTL4Q6ZR62 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RTL4Q6ZR62 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTL4Q6ZR62 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.83■□□□□ 0.77
RTL4Q6ZR62 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms